PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf11799g00003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 295aa    MW: 32743.6 Da    PI: 5.6434
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf11799g00003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.5e-06119146330
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                               + h ++Er+RR+r  + f+ L + +P +
  Peinf101Scf11799g00003.1 119 QDHLMAERKRRERFSQLFASLAKTIPGL 146
                               67999*********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.2E-7109162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-4120148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MENTNYNNLE NNTGGEEAPF EFKNLLSEMF TSFPNQNPSS SSLEHGNTNL KVALPSSPSS  60
TSSNSSSSSH NMISFGNPAE SNFLGDEQDY DMMSVEKVMT LSSSTSLPKR ISRSPLQSQD  120
HLMAERKRRE RFSQLFASLA KTIPGLKKYI EQLQGRVRAL EEAGTKRNLN IESIATPKQS  180
LAATSDDKTF LTKDIADDDC SMKSNPENEI KVRIVDKNVL IGIHCSNSRR NIFSLIAGTM  240
EKLHLTIHNI RVTPFNHTAL NIAILSQIDQ NVDITVQDVE NAFELALFST PNPTD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019249041.11e-109PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1J6IQ151e-108A0A1J6IQ15_NICAT; Transcription factor bhlh18
STRINGXP_009623662.11e-108(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125981122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-22bHLH family protein