PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf06681g00001.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 308aa MW: 33784.2 Da PI: 6.6496

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf06681g00001.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.1	0.00036	190	213	32	55
..TTS-STCHHHHHHHHHHHHHHH CS HLH 32 kapskKlsKaeiLekAveYIksLq 55 +++s++ +Ka +L +++eY+ +Lq Peinf101Scf06681g00001.1 190 HNKSERTNKALMLDEVIEYMTQLQ 213 4599*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	3.5E-5	178	220	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.93E-5	190	228	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
MDDFPPHPNL ALCSYSNLNS FVNDVPSLDY EVEELTWENG EQAMHGLGPL HLLNNKPLSN 60 SSPTQYTWDH HKPQVGGSGT LESIVNQATG IPHHRPKSPV DDIGGDRGDE LMSWFDTYIA 120 NTMTRDALLP SYINTQNSHQ RVAPSTHVPS ISGTCLVGGS THGEVEEEDK EKQSKVSSSS 180 TKRRKAAIKH NKSERTNKAL MLDEVIEYMT QLQAQVQAMS NGMMYPMMLP VAVQQQLQMS 240 MMAPAMRMRM AALTRPNATT TSAVLHPTTS FMPITSGVSP KGPVNVASTF PVVPNPLSTF 300 QSQILANK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009762879.1	3e-44	PREDICTED: transcription factor UNE10-like
TrEMBL	A0A498JF35	3e-47	A0A498JF35_MALDO; Uncharacterized protein
STRING	XP_009762879.1	1e-43	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15785	2	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	7e-18	bHLH family protein