PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05187g00008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 429aa    MW: 48087.7 Da    PI: 5.1233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05187g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.4e-1490137355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h ++Er+RR+++ + f  L +++P +     kKl+K++iL+ ++eY+k+Lq
  Peinf101Scf05187g00008.1  90 QDHVAAERNRREKMSQLFISLSKIVPGL-----KKLDKSSILRDTIEYMKELQ 137
                               6799************************.....9******************9 PP
2HLH15.33.6e-053143333655
                               S-STCHHHHHHHHHHHHHHH CS
                       HLH  36 kKlsKaeiLekAveYIksLq 55 
                                 l+K++iL+ ++eY+k+Lq
  Peinf101Scf05187g00008.1 314 DILDKSSILRDTIEYMKELQ 333
                               579****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.81587136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-1190137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1691150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.42E-1292141No hitNo description
SuperFamilySSF474591.7E-1692148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.6E-1593142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM0035310300338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-5314343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-6315345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MAYTGFNQED LKQNLSYTIE EKAQKAISYS PLISSSGLLI SFGSSSLNPA VISEEDDIAS  60
MIKYSHLEES AYQESGGNNI VYKRTPLQAQ DHVAAERNRR EKMSQLFISL SKIVPGLKKL  120
DKSSILRDTI EYMKELQEQV KVLEETKKNI PSAWENNDSS SSKENVNCSN QVVGSNIKAR  180
ISNRSVLINI HCNKEDGMVE RVLSQMEQLH LAVHDIRIMP FGLANLDISI LAEENVNCSN  240
QVVGSNIQAR ISNKSVLINI HCNKEDGMVE RVLSQMEQLH LAVHDIRIMP FGLTNLDISI  300
LAEMESGCCI TVQDILDKSS ILRDTIEYMK ELQEQVKVLE ETKKNIPSAW ENNDSSSSKE  360
NVNCSNQVVG SNIQARISNK SVLINIHCNK EDGMVERVLS QMEQLHLAVH DIRIMPFGLT  420
NLDISILAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768662.11e-85PREDICTED: transcription factor bHLH18-like
RefseqXP_016472308.11e-85PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1S4A6N73e-84A0A1S4A6N7_TOBAC; transcription factor bHLH18-like
TrEMBLA0A1U7VKZ03e-84A0A1U7VKZ0_NICSY; transcription factor bHLH18-like
STRINGXP_009768662.15e-85(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88641628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.13e-28bHLH family protein