PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04519g02046.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 642aa    MW: 71477.8 Da    PI: 4.5727
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04519g02046.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.95e-50141421128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               lp+G+rF+Ptdeelv++yL+ k++g + ++ +vi+evdi+k+ePwdLp  + v++++++w+fF++ d+ky++g+r nrat++gyW
  Peinf101Scf04519g02046.1  14 LPVGYRFRPTDEELVNHYLRLKINGFDDKV-SVIREVDICKLEPWDLPdlSVVESQDNDWFFFCPIDRKYQNGQRLNRATERGYW 97 
                               799************************999.99**************96448888999*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               katgkd+++++kkg+++g+kktLv+y grap+g++t Wv+heyr+
  Peinf101Scf04519g02046.1  98 KATGKDRNIVTKKGAKIGTKKTLVYYIGRAPEGKRTFWVIHEYRA 142
                               *******************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-5610165IPR003441NAC domain
PROSITE profilePS5100553.64314165IPR003441NAC domain
PfamPF023657.7E-2515141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    Send to blast
MVVHNVEVPP LNSLPVGYRF RPTDEELVNH YLRLKINGFD DKVSVIREVD ICKLEPWDLP  60
DLSVVESQDN DWFFFCPIDR KYQNGQRLNR ATERGYWKAT GKDRNIVTKK GAKIGTKKTL  120
VYYIGRAPEG KRTFWVIHEY RATDKSLNGS HPGQGAFVLC RLFKKDDLKQ DGNVEGSHLD  180
EVERLVSSPA VGKSPTSDEL SEAVTPSPIM QPSSDSDKIY LPKVCGGETH GTTDSHGNSC  240
TADDTEDLML DISSMPPDPE LEKLLEMFCD PSPQPLDWKN VSPLHSQLQV EFGSANLHAP  300
LTNEINYDIK DVQLQNGTKP LDINDFFSSV LVSSDELFYE ESGVELRPVQ LSSNGVNTIT  360
RAPLKDSGSC SETETQFTQE PNTDLLLPLF FSQIGSDFFE PKLLYGNSDE ETALMREVNS  420
VATTEEQACG TPCVSNDHSM GNLDFHNKLY PGEVALSAGS GGMQVPSLLD VEEMSDCINV  480
RHDSGFGTGI ILRTRQMYNQ PDDNQFELGL QGSTHRRIRL QLKLQAGAGE CRMPTHSDQD  540
GASHEGLSAV TRNEKASTEH DSTANAASAS DETQDTMCEE LKRDGQEMED SSANVKETDG  600
FPICKTSKTT TLHEFFVYIP KVLIVLSLLV VFFGFWGFFR LR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-4371708170NO APICAL MERISTEM PROTEIN
1ut4_B6e-4371708170NO APICAL MERISTEM PROTEIN
1ut7_A6e-4371708170NO APICAL MERISTEM PROTEIN
1ut7_B6e-4371708170NO APICAL MERISTEM PROTEIN
3swm_A9e-43717011173NAC domain-containing protein 19
3swm_B9e-43717011173NAC domain-containing protein 19
3swm_C9e-43717011173NAC domain-containing protein 19
3swm_D9e-43717011173NAC domain-containing protein 19
3swp_A9e-43717011173NAC domain-containing protein 19
3swp_B9e-43717011173NAC domain-containing protein 19
3swp_C9e-43717011173NAC domain-containing protein 19
3swp_D9e-43717011173NAC domain-containing protein 19
4dul_A6e-4371708170NAC domain-containing protein 19
4dul_B6e-4371708170NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016491940.10.0PREDICTED: protein NTM1-like 9
TrEMBLA0A1S4BSS70.0A0A1S4BSS7_TOBAC; protein NTM1-like 9
STRINGXP_009760820.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33632448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.11e-80NAC domain containing protein 62