 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf04017g01006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 310aa MW: 34848.1 Da PI: 6.1429 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf04017g01006.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 159.6 | 1.3e-49 | 5 | 123 | 1 | 121 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
lppGfrFhPtdeel+ +yL++kv++ ++++ +++++vd++k+ePwdLp+k++ ++kewyfF rd+ky+tg r+nrat++gyWk+
Peinf101Scf04017g01006.1 5 LPPGFRFHPTDEELIIYYLTNKVSDVSFSA-RAFADVDLNKCEPWDLPAKASMGKKEWYFFNLRDRKYPTGLRTNRATEAGYWKT 88
79**************************99.88***************9999999****************************** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdW 121
tgkdke+++ +g lvg+kktLvfy+grapkg+kt+W
Peinf101Scf04017g01006.1 89 TGKDKEIFH-GGVLVGMKKTLVFYRGRAPKGQKTNW 123
*********.************************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MEETLPPGFR FHPTDEELII YYLTNKVSDV SFSARAFADV DLNKCEPWDL PAKASMGKKE 60
WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFHGGV LVGMKKTLVF YRGRAPKGQK 120
TNWEEWVVCR VFQKSSTVKK QQPTSSSPQY SLESPNCDTN YTIANEIGDI HELLNFNGIA 180
TPSNGINNNI SLQNYVNENM NMNLNLAAAT NIVPLLPNLS SSLLSSNLSS VNSLLLRALQ 240
SRVYNQPREA ATVSDYYSLI TPSLQGISHF GNDFTNSNFA EGVASSSMVL DSVQQQQVQE 300
EPCKLDIDIW
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-49 | 4 | 140 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-49 | 4 | 140 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-49 | 4 | 140 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-49 | 4 | 140 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-49 | 4 | 140 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-49 | 4 | 140 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-49 | 4 | 140 | 16 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF510212 | 0.0 | AF510212.1 Petunia x hybrida nam-like protein 15 (NH15) mRNA, partial cds. |
