PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf03815g00013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 25622.1 Da PI: 4.5919 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.4 | 7.6e-18 | 28 | 78 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr +k +g++v+eIr p++ r r++lg+++tae+Aa+a +aa +l+ge Peinf101Scf03815g00013.1 28 KYRGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRGE 78 8*****999.**********933...5**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 6.23E-29 | 27 | 87 | No hit | No description |
SuperFamily | SSF54171 | 3.27E-20 | 28 | 86 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.9E-34 | 28 | 91 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.509 | 28 | 85 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-29 | 28 | 86 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-10 | 28 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.9E-10 | 29 | 40 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.9E-10 | 51 | 67 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MVKPERQTCH QDSCTLAQSS SSSSSSAKYR GVRKRKWGKY VSEIRLPNSR ERIWLGSYDT 60 AEKAARAFDA ALFCLRGETA KFNFPNNPPD ILNGRSMTPA EIQVAAAQYA NTDTDAGVPI 120 SNWNPRDNSD PSSSLSSSSE MFRAESPSVS VSGGVVQETE KTEMALENGF VDMFSSMGTT 180 NNVYDFGIFP GFDDFSGDYY VPPMPNVDTV EENYHNYDGF HLQGSSFLWN F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 7e-18 | 23 | 86 | 9 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00151 | DAP | Transfer from AT1G19210 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009624342.1 | 1e-114 | PREDICTED: ethylene-responsive transcription factor ERF017 | ||||
TrEMBL | A0A1S3XUX5 | 1e-113 | A0A1S3XUX5_TOBAC; ethylene-responsive transcription factor ERF017-like | ||||
STRING | XP_009624342.1 | 1e-114 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1939 | 24 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 8e-56 | ERF family protein |