PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf03443g01010.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

TCP

Protein Properties

Length: 523aa MW: 55993.5 Da PI: 7.3653

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03443g01010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.1	2.1e-40	136	240	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 ++ k+ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ Peinf101Scf03443g01010.1 136 PPPKRATKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSTL 220 567999***************************************************************9997777777777744 PP TCP 86 ssgkaaksaakskksqksaasalnlak 112 s++ +sk++++s +sal+la+ Peinf101Scf03443g01010.1 221 SAP-------PSKSAPHSFHSALALAA 240 444.......33444444444444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	1.0E-38	141	242	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	28.542	142	196	IPR017887	Transcription factor TCP subgroup

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0001047	Molecular Function	core promoter binding

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence Send to blast
MELTDLQNNN TNSTSKQNSS TNNTTTAQPL HQQYHQLIHH HQHLQQQQHG RSSSVPFAQP 60 AGPTSSLAAA ASPSPTSASA SASSPSPQQQ QPPHLVDASL AIATRSDSLT DPTKKLQQQQ 120 QQQQQSIQQA PQQPPPPPKR ATKDRHTKVD GRGRRIRMPA ACAARVFQLT RELGHKSDGE 180 TIEWLLQQAE PAIIAATGTG TIPANFSTLN ISLRSSGSTL SAPPSKSAPH SFHSALALAA 240 AHHPAHPFEE GFSHMLGFHQ NPHLLTQSQI QETIQGGGAG GGSSGDGGGQ EGTENYLRKR 300 YREDLFKEEG SSNPQGEASG GSTSPSNKQF KGNSSQLSKP SQEGVVGPSS SMLRHTNMMP 360 ATGLWAVTPP PNSGTTGSPF WMLPVTASGS VQTLSAPMAS TSGTTTLESQ MWPFPMGNSN 420 TIQAPLHFMP RFNIPPNLEF QSGRGNPLQL GSMIMQQQQQ QPSQHLGLGM SENNLGMLAA 480 LNAYSRSGLN MNSDHQSHSL EHHQQQHQPQ PTDSEEDDPN SSQ

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence Send to blast

MELTDLQNNN TNSTSKQNSS TNNTTTAQPL HQQYHQLIHH HQHLQQQQHG RSSSVPFAQP  60
AGPTSSLAAA ASPSPTSASA SASSPSPQQQ QPPHLVDASL AIATRSDSLT DPTKKLQQQQ  120
QQQQQSIQQA PQQPPPPPKR ATKDRHTKVD GRGRRIRMPA ACAARVFQLT RELGHKSDGE  180
TIEWLLQQAE PAIIAATGTG TIPANFSTLN ISLRSSGSTL SAPPSKSAPH SFHSALALAA  240
AHHPAHPFEE GFSHMLGFHQ NPHLLTQSQI QETIQGGGAG GGSSGDGGGQ EGTENYLRKR  300
YREDLFKEEG SSNPQGEASG GSTSPSNKQF KGNSSQLSKP SQEGVVGPSS SMLRHTNMMP  360
ATGLWAVTPP PNSGTTGSPF WMLPVTASGS VQTLSAPMAS TSGTTTLESQ MWPFPMGNSN  420
TIQAPLHFMP RFNIPPNLEF QSGRGNPLQL GSMIMQQQQQ QPSQHLGLGM SENNLGMLAA  480
LNAYSRSGLN MNSDHQSHSL EHHQQQHQPQ PTDSEEDDPN SSQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795828.1	0.0	PREDICTED: transcription factor TCP8-like
TrEMBL	A0A1U7XY29	0.0	A0A1U7XY29_NICSY; transcription factor TCP8-like
STRING	XP_009795828.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11484	21	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-66	TCP family protein