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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf03438g00027.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 410aa MW: 46233.7 Da PI: 7.0217 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf03438g00027.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 167.3 | 5.1e-52 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
+ pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wka
Peinf101Scf03438g00027.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRSLSI-ELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKA 97
579***************************.89***************9888999****************************** PP
NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+d++++s+ ++ +glkk+Lvfy+gra +g ktdW+mhe+rl
Peinf101Scf03438g00027.1 98 TGTDRPIYSSdCTKCIGLKKSLVFYRGRAARGIKTDWMMHEFRL 141
*********967778***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MDEKVDVEKL DEVMLPGFRF HPTDEELVGF YLKRKIQQRS LSIELIKQVD IYKYDPWDLP 60
KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDCT KCIGLKKSLV 120
FYRGRAARGI KTDWMMHEFR LPTTSSDSAP PKKFLDKNFP PNDSWAICRI FKKTNSMANR 180
ALSYPWVTPL SDVTSPPEVF NQSANSIHFS SDNNDLLQGG LTDNFSALNA LSYKALNTMV 240
SRPSFVASPS SDVSYNFMFS SPEVSGSMFF NTSPALITDD IKTSETIDFE GPQQQLNGFS 300
VSTSQEMQRS ISMEDDEAGL RSNQDSNNDN TTQWENIRSS IGFPFSLTTS LADAWKPSLP 360
WDSPSCRGIS HLDLAKSTES LSSFNLKKTS TGYKSIPQNP HTEPSISSPR
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-52 | 16 | 176 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-52 | 16 | 176 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-52 | 16 | 176 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-52 | 16 | 176 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 4e-52 | 16 | 176 | 22 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 4e-52 | 16 | 176 | 19 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 4e-52 | 16 | 176 | 19 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975441 | 2e-97 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |
