PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03215g00003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 303aa    MW: 33970.4 Da    PI: 5.6758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03215g00003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.6e-13122169355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h  +Er+RR+   + f+ L + +P +     kKl+Ka++Le A++YI +Lq
  Peinf101Scf03215g00003.1 122 QDHLLAERKRRESFTQLFAALAKTIPDL-----KKLDKASVLEDAIKYIEQLQ 169
                               668899**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.577119168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-11122169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-14123180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.30E-10124173No hitNo description
SuperFamilySSF474597.85E-15124181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-13125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MENTSFNNLE NNIGREAPFE FKNLLSEMFS SFPNRNPSRS PLEHGNTIVK EASKAAFPSS  60
PPSTPNPSSS HNIISFGNPA ESNYFLGDEQ DYDMMSVEKV MSLSSSSTSM AKRICRSPLQ  120
SQDHLLAERK RRESFTQLFA ALAKTIPDLK KLDKASVLED AIKYIEQLQE RIRDLEEGTK  180
QNLNIESTVM LKYPLAATSD DNTSLTKNID ESKPENEIKV QFVHKNVLIG VHCSKTRRSI  240
LSIIAGTMEK LRLTIHNIRV TPCNHTALNI SIFSEVDQDV DISVQDVEKA FELAFLSTPN  300
MAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132ERKRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019249041.11e-119PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1J6IQ151e-118A0A1J6IQ15_NICAT; Transcription factor bhlh18
STRINGXP_009623662.11e-117(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125981122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-27bHLH family protein