PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03171g03020.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 605aa    MW: 66486.5 Da    PI: 7.0794
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03171g03020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.1e-29325382260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               +DgynWrKYGqK v+g+ef+rsYYrCt+++C +kk+vers+ d+++++i+Y  +H+h+k
  Peinf101Scf03171g03020.1 325 EDGYNWRKYGQKLVRGNEFTRSYYRCTHPNCVAKKQVERSH-DGHITDIHYIAKHEHPK 382
                               7****************************************.***************85 PP
2WRKY102.52.5e-32501559159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ++Dgy+WrKYGqK+vkg+++prsYYrC+sagCp+kk+ver+++d k+v++ Yeg+H h+
  Peinf101Scf03171g03020.1 501 VNDGYRWRKYGQKMVKGNPNPRSYYRCSSAGCPAKKHVERASHDSKLVITAYEGQHVHD 559
                               58*******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.332319383IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-25321383IPR003657WRKY domain
SuperFamilySSF1182907.72E-24322383IPR003657WRKY domain
SMARTSM007747.4E-32324382IPR003657WRKY domain
PfamPF031061.9E-22325381IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-34487561IPR003657WRKY domain
SuperFamilySSF1182905.1E-28493561IPR003657WRKY domain
PROSITE profilePS5081134.968496561IPR003657WRKY domain
SMARTSM007746.3E-38501560IPR003657WRKY domain
PfamPF031061.6E-25502558IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
QKHDPDNVTN RSESEEKGRC ASLSAEVVSD ALQKRLSSDV LAKASQSDQD EGACPTTYQE  60
ISHELQPRDS VDKGIDASQS NQEVNALSKV PNKDSEDVHQ KKGPDSKGGA SESKVKGSSA  120
SMSVEVVYHE LNKRLSRAEV VYHELNKRLN GDACKASESI REEGAHPAGC QEVSGEAQPT  180
ESVDEGIDGS QSNQEDSSLS KVPEEESDNV HQKKGPKSEG GASESSQVPF LPKKEPYIKA  240
CRSDSPVKDK NISPVPGKTL DSSQQIQSQK MEAVVRPDQE QVTYSIRPEK ALNKLQPRRN  300
PDMGVQALPS DLGIHPFRAP EKPSEDGYNW RKYGQKLVRG NEFTRSYYRC THPNCVAKKQ  360
VERSHDGHIT DIHYIAKHEH PKPLNSPQTP PESVVPLKMR RQDMPMGAPR EAEGEKSIEL  420
GQTCQSIKPS ESPLPQTILS DGGCAIDTVR KPHKSGDEAD NGGPDSKRQK KEVPKNDDTP  480
PIKYHSEPRN IVQTMSVVDI VNDGYRWRKY GQKMVKGNPN PRSYYRCSSA GCPAKKHVER  540
ASHDSKLVIT AYEGQHVHDV PPSRTVMQNS AGADSNTTRI SGEATSESGE NKRVGVDRVV  600
HIGAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-34326562275WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019250091.10.0PREDICTED: WRKY transcription factor 1-like isoform X1
TrEMBLA0A1J6I8I40.0A0A1J6I8I4_NICAT; Putative wrky transcription factor 20
STRINGXP_009605529.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.26e-74zinc-dependent activator protein-1