PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf03039g04017.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 367aa MW: 40673.7 Da PI: 4.6093

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03039g04017.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.7	1.3e-10	292	332	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L++l+P+ +K++ +++Le+Av+Y+k Lq Peinf101Scf03039g04017.1 292 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 332 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.4E-14	282	347	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.428	282	331	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.9E-12	287	341	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.2E-11	288	337	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.04E-12	291	336	No hit	No description
Pfam	PF00010	6.6E-8	292	332	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009555	Biological Process	pollen development
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence Send to blast
MEPVGAMSEA EWSSLSGTCP TEEADFMAQL FGSCPNEQPS SSNVGLPIFW TSHDQSSMNM 60 ESGTSQVSMY NSSDETNNSM YIFSQGISNS DGSSILYPPP SHGSYYPSTF QPNFLTNNTS 120 MTMELSNRVE DKISSPSDQV AASNVIEADH AINFLNQEVS NDSMESGENM PETDNHGKNL 180 QLGREYEMQV PEKSSQDRED SPSESSKKRS RLPVDIPKNK RSTKPKKNMK TADENGKDNT 240 NVLHRQSSFS CCSEDESNFS YDLNGLTSST NSKGKSRASR GSATDPQSLY ARKRRERINE 300 RLRILQSLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DDLWMYSPIA YNGMDLGLDL 360 KLGAPNS

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence Send to blast

MEPVGAMSEA EWSSLSGTCP TEEADFMAQL FGSCPNEQPS SSNVGLPIFW TSHDQSSMNM  60
ESGTSQVSMY NSSDETNNSM YIFSQGISNS DGSSILYPPP SHGSYYPSTF QPNFLTNNTS  120
MTMELSNRVE DKISSPSDQV AASNVIEADH AINFLNQEVS NDSMESGENM PETDNHGKNL  180
QLGREYEMQV PEKSSQDRED SPSESSKKRS RLPVDIPKNK RSTKPKKNMK TADENGKDNT  240
NVLHRQSSFS CCSEDESNFS YDLNGLTSST NSKGKSRASR GSATDPQSLY ARKRRERINE  300
RLRILQSLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DDLWMYSPIA YNGMDLGLDL  360
KLGAPNS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019264160.1	1e-176	PREDICTED: transcription factor bHLH84
TrEMBL	A0A1J6JNX6	1e-175	A0A1J6JNX6_NICAT; Transcription factor bhlh84
STRING	XP_009598406.1	1e-171	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	6e-53	bHLH family protein