PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf03018g00021.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 374aa MW: 44015.3 Da PI: 6.9434

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03018g00021.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	150.8	6.5e-47	76	201	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 ppG+rF P deel+++yL+kkv +++l+ + i ev++y++ P++L k +ekewyfF++rd+ky++g+r+nra+ +gyWka Peinf101Scf03018g00021.1 76 PPGYRFCPYDEELIMHYLRKKVMNQPLPH-DKIIEVNLYQHSPQELSeKYPVLGEKEWYFFTPRDRKYPNGNRPNRAAGTGYWKA 159 9*************************9.7799********9344444899************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg dk+++ k+ +vg +k Lvfy+g+ pkg kt+W+mhe+r+ Peinf101Scf03018g00021.1 160 TGADKPIKY-KDVKVGFRKALVFYEGKPPKGDKTNWIMHEFRV 201 *****.8999*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.14E-57	72	227	IPR003441	NAC domain
PROSITE profile	PS51005	55.03	75	227	IPR003441	NAC domain
Pfam	PF02365	2.1E-25	76	201	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MEIEQSNAQL TASSWNATTR NPQIQEPNKQ KQVDEDEKVL IVKPNSNDSL SYETKLKLNA 60 KANIRKDYVD DNFMFPPGYR FCPYDEELIM HYLRKKVMNQ PLPHDKIIEV NLYQHSPQEL 120 SEKYPVLGEK EWYFFTPRDR KYPNGNRPNR AAGTGYWKAT GADKPIKYKD VKVGFRKALV 180 FYEGKPPKGD KTNWIMHEFR VNESRRVKQN AKDMRLDDWV LCRIYKKVDK SFKSTRKEHE 240 QQYASRSCSS VGKMDNCDYE GTVDSSIVAS QNFEPPYQYD ITFDDHIIMD YTKYNPDYFS 300 HSLCYGARSN YGMVQPSFSP GSVFWDQKVY QESINFPMHF EFPNYYQDPY ETMDELQSQN 360 VLGSVFDNSS MDKL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MEIEQSNAQL TASSWNATTR NPQIQEPNKQ KQVDEDEKVL IVKPNSNDSL SYETKLKLNA  60
KANIRKDYVD DNFMFPPGYR FCPYDEELIM HYLRKKVMNQ PLPHDKIIEV NLYQHSPQEL  120
SEKYPVLGEK EWYFFTPRDR KYPNGNRPNR AAGTGYWKAT GADKPIKYKD VKVGFRKALV  180
FYEGKPPKGD KTNWIMHEFR VNESRRVKQN AKDMRLDDWV LCRIYKKVDK SFKSTRKEHE  240
QQYASRSCSS VGKMDNCDYE GTVDSSIVAS QNFEPPYQYD ITFDDHIIMD YTKYNPDYFS  300
HSLCYGARSN YGMVQPSFSP GSVFWDQKVY QESINFPMHF EFPNYYQDPY ETMDELQSQN  360
VLGSVFDNSS MDKL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-56	75	227	15	168	Stress-induced transcription factor NAC1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019223930.1	1e-177	PREDICTED: NAC transcription factor 29-like
TrEMBL	A0A314KX34	1e-176	A0A314KX34_NICAT; Nac transcription factor nam-b1
STRING	XP_009759087.1	1e-172	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA746	24	103

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	2e-65	NAC domain containing protein 32