PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf02877g01017.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

WRKY

Protein Properties

Length: 67aa MW: 7940.27 Da PI: 10.7893

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02877g01017.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	29.3	1.7e-09	46	67	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYG+K+vk++++ r Peinf101Scf02877g01017.1 46 LDDGYKWRKYGKKKVKSNTNLR 67 59***************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.5E-9	32	67	IPR003657	WRKY domain
SuperFamily	SSF118290	1.18E-7	39	66	IPR003657	WRKY domain
PROSITE profile	PS50811	10.9	41	67	IPR003657	WRKY domain
Pfam	PF03106	1.5E-5	47	67	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 67 aa Download sequence Send to blast
MQEISSTTPP NIYLKEKSKV GIKKDKIMNE RHDAIAFRTK TRLEILDDGY KWRKYGKKKV 60 KSNTNLR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975451	1e-35	HG975451.1 Solanum pennellii chromosome ch12, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009763636.1	4e-22	PREDICTED: probable WRKY transcription factor 51
Refseq	XP_016482352.1	4e-22	PREDICTED: probable WRKY transcription factor 51
TrEMBL	A0A1S4B088	1e-20	A0A1S4B088_TOBAC; probable WRKY transcription factor 51
TrEMBL	A0A1U7VFG7	1e-20	A0A1U7VFG7_NICSY; probable WRKY transcription factor 51
STRING	XP_009763636.1	2e-21	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA14192	10	13