PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02665g01005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family CAMTA
Protein Properties Length: 873aa    MW: 98601.4 Da    PI: 8.8682
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02665g01005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1169.64.8e-53151322118
                      CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 
                               l+e ++rwl++ ei++iL n++k+ lt e++ rp+ gs++L+++k+  yfrkDG+sw+kkkdgktv+E+hekLK g v+vl+cyY
  Peinf101Scf02665g01005.1  15 LQEaQHRWLRPVEICEILRNHQKFYLTPEPPVRPPGGSMFLFDQKVQSYFRKDGHSWRKKKDGKTVQEAHEKLKAGRVDVLHCYY 99 
                               56669******************************************************************************** PP

                      CG-1  86 ahseenptfqrrcywlLeeelekivlvhylevk 118
                               ah+e+n++fqrr+yw+L e+l++ivlvhy+evk
  Peinf101Scf02665g01005.1 100 AHGEDNKNFQRRSYWMLAEQLKHIVLVHYREVK 132
                               ******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143777.22611137IPR005559CG-1 DNA-binding domain
SMARTSM010769.6E-7314132IPR005559CG-1 DNA-binding domain
PfamPF038592.6E-4717130IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.102.3E-8324413IPR013783Immunoglobulin-like fold
CDDcd001021.94E-4325413No hitNo description
PfamPF018331.7E-7325411IPR002909IPT domain
SuperFamilySSF812961.27E-16326412IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.6E-15504624IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.89E-15507619IPR020683Ankyrin repeat-containing domain
CDDcd002043.65E-12518616No hitNo description
PROSITE profilePS5029716.282524628IPR020683Ankyrin repeat-containing domain
SMARTSM002480.016557589IPR002110Ankyrin repeat
PROSITE profilePS5008810.472557589IPR002110Ankyrin repeat
SMARTSM00248670596625IPR002110Ankyrin repeat
SMARTSM0001570677699IPR000048IQ motif, EF-hand binding site
SMARTSM000151.6731753IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.041732761IPR000048IQ motif, EF-hand binding site
SMARTSM00015160754776IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.705835863IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 873 aa     Download sequence    Send to blast
MFLEFEEVTN LEQLLQEAQH RWLRPVEICE ILRNHQKFYL TPEPPVRPPG GSMFLFDQKV  60
QSYFRKDGHS WRKKKDGKTV QEAHEKLKAG RVDVLHCYYA HGEDNKNFQR RSYWMLAEQL  120
KHIVLVHYRE VKEGYRVGAS SLQFIHQAPQ LENTQSSSTL CFESGLIVQE SHSSSPSTVD  180
SKQQALSSEL FSDDPKGDEA DPLLVSASAH FLPINSPLST MKQTGLVEIS RGSFQLNPQF  240
SSFLSTDFHS SDRILNVNMA DLLYSGRLNI ADLLSNKLSY SRLDAAKAVK VVANIRNRLA  300
IASGELLELD TDSLGPSLSR EQLFSISEFS PDWVFSGLET KVLIIGTFLG HGKHPAWQKW  360
SCMFGEVEVP AEVLSQNIIR CQVPSHAPGR VPFYLTCSNR LACSEVREFE YREKPSELAL  420
ILRPSDEVRL QVRLAKLLYS GLNRKFLDCS RKECEKCKLK NLLRSLKCGT GNDSERLEDL  480
LAIIEGNLIN FREILIQNFM KDKLYEWLLS RAHEEKVPNL LDDEGQGVIH LVAALGSEWG  540
LLPLISAGLS PNFRDARGRT ALHWASHYGR EDMVIALVKL GVAAGAVDDP TAAFPGGQTA  600
ADLAFSGGHK GIAGYLAESD LTTHLQSMVI NNNALDNIAA ELEAEKAFQS AAQEVVPFNE  660
MINDDFFLRV SLASVRKSAH AASLIQAAFR ARSFRQRQLT ENRNDVSEAL VDLVALGSLN  720
KVQKVNHFED YLHSAAIKIQ HKYRGWKGRS EFLKIRNRIV NNQAHVRGHQ VKQYKKFVWS  780
VSVVEKAILR WRRKKPGLRG FRPQKTSQKG PAELEKNDEY EFLSIGREQK LVGVEKALSR  840
VQSMVRHPEA RDQYIRLVAK FERSKGDDGG SRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574930.10.0PREDICTED: calmodulin-binding transcription activator 3-like isoform X1
SwissprotQ6NPP41e-134CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A2G2ZAP40.0A0A2G2ZAP4_CAPAN; Uncharacterized protein
STRINGXP_009793082.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137161011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-121Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]