PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02602g02011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 187aa    MW: 20742 Da    PI: 4.7839
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02602g02011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.47e-081447134
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkg 34
                              +g+W +eEd++l++++k  G + W++ ++  gk 
  Peinf101Scf02602g02011.1 14 KGPWAPEEDDKLIEYIKNNGHNGWRSLPKLAGKS 47
                              79***************************99943 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.3E-12550IPR009057Homeodomain-like
SuperFamilySSF466891.72E-7852IPR009057Homeodomain-like
PROSITE profilePS500907.503960IPR017877Myb-like domain
PfamPF002497.6E-61449IPR001005SANT/Myb domain
CDDcd001670.001461657No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MGRAPCCDKK GLKKGPWAPE EDDKLIEYIK NNGHNGWRSL PKLAGKSQND YILRIWNSEI  60
GEAFRNFKGV EKTTSESSSP KCGSTSSITT EMDITLAGSS VEGTNQHKDA EWKNCKPYTG  120
NIWHGSDTCS SNDFEESSES ALQLLLDVPS KYDLSFLGQN DACSMYPAFL SESCLNCSST  180
EHEVFYL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754444e-32HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019176249.13e-42PREDICTED: myb-related protein 308-like
RefseqXP_019176250.13e-42PREDICTED: myb-related protein 308-like
RefseqXP_019176251.13e-42PREDICTED: myb-related protein 308-like
RefseqXP_019176252.13e-42PREDICTED: myb-related protein 308-like
SwissprotQ9M2D91e-17MYB17_ARATH; Transcription factor MYB17
TrEMBLA0A3Q7EKV65e-40A0A3Q7EKV6_SOLLC; Uncharacterized protein
STRINGSolyc01g094360.2.19e-41(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.16e-20myb domain protein 17