PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02318g03011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bZIP | ||||||||
Protein Properties | Length: 561aa MW: 61013.6 Da PI: 6.4327 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.4 | 1.8e-09 | 459 | 500 | 11 | 52 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 NR +A rs +RK +i+eLe kv++L++e ++L +l l Peinf101Scf02318g03011.1 459 LANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLL 500 67*********************************9998776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.2E-7 | 449 | 513 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.703 | 451 | 501 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-10 | 457 | 501 | No hit | No description |
CDD | cd14703 | 8.42E-23 | 457 | 501 | No hit | No description |
SuperFamily | SSF57959 | 1.38E-9 | 457 | 501 | No hit | No description |
Pfam | PF00170 | 1.2E-7 | 457 | 500 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 561 aa Download sequence Send to blast |
MAADNDDGNS NTVQRLQSTF GTSSSVKQQS ILMNQLDIPQ LTTSQFHGQM RQFSPNFGVD 60 NSAKRVGIPP SHSQMPPISP YSQIPVTRPG NQQMGMQNFT SPGASHSRSL SQPAFFSLDS 120 LPPLSPSPYR DSPSTSISDA ISTDVSMGDQ DGNSHSLLPP SPFSRCNSSR VGESLPPRKA 180 HRRSNSDIPF GFSAIMQSSP PLVPLRSPGV LERSVPSRDN SGGGKPVQLV KREAWDTGNA 240 NNVEGMGERK CEGEVVDDLF SAYMNLDNID ALNSSETDEK QGNENREDLD SRASGTKTNG 300 GDSSDNEATS SVNDSGGSMQ RLGVSSSVEK REGVKRNAAE DIAPTTRHYR SVSMDSFVGK 360 LNFIDDSPKL PPSPGPRPGQ LSPTSSLDAN SDGFSLEFGN GEFSGAELKK IMANEKLAEI 420 ALADPKRAKR LNSPQSDACI FLFNPLSYAT DMPYHCRILA NRQSAARSKE RKMRYIAELE 480 HKVQTLQTEA TTLSAQLTLL QVITSSIWSV SSSSYPFCHY FNISCTCIQR DSAGLTSQNN 540 ELKFRLQAME QQAQLRNGTF F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT014576 | 0.0 | BT014576.1 Lycopersicon esculentum clone 134031F, mRNA sequence. | |||
GenBank | HG975440 | 0.0 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019232601.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_019232602.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
TrEMBL | A0A1J6KGZ0 | 0.0 | A0A1J6KGZ0_NICAT; Transcription factor rf2a | ||||
STRING | XP_009804619.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1265 | 24 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.1 | 1e-131 | bZIP family protein |