PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02318g01007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 432aa    MW: 48754.7 Da    PI: 6.4024
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02318g01007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.93e-10383431348
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                               +W+  E++ l  +v+++G+g+Wk+I          Rt+ ++k++w++++
  Peinf101Scf02318g01007.1 383 KWSVLEEDTLRAGVQKYGSGNWKLILDAYHdvfAVRTAVDLKDKWRNLM 431
                               8********************************78************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.886376432IPR017930Myb domain
SuperFamilySSF466892.42E-14378431IPR009057Homeodomain-like
SMARTSM007175.1E-5380432IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.0E-11382432IPR009057Homeodomain-like
CDDcd116604.35E-18383432No hitNo description
PfamPF002499.8E-9383430IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MDIDISRWIL EFVIQQPIPD DLLNSLFKSL PIPENNFYIK KALILRKIES EISNGSVSER  60
ILELIELFEE LDFQQGIESL DDMKWAYCAV AVECSVKFLK RKMAGNDKGE YYEAVRRIWK  120
RRVDLLGNVE YNNVGVVSDE LWEWRDEIEA ALFVDRFCDR VIRRSEEVCG VDAVKAFVRG  180
AKERMGPPFL VLVADFYMSN EAFRALLGGV NNEGSCKDNE REVCKENTLP KKKHGARKHT  240
KGASARTCRG VRIADSIQSG LDAAGEQDNL LPTPDVEGAK AALKLSSLEL RAMVKDPLPD  300
ALKLAETLPS VVRDNVGHQP ATDPNLMNQK SAAHTSEDDS IEDSSQGSPS GEKITLPSPK  360
KMETSPLKKY EFKKITTRRK ATKWSVLEED TLRAGVQKYG SGNWKLILDA YHDVFAVRTA  420
VDLKDKWRNL MK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009772851.10.0PREDICTED: uncharacterized protein LOC104223173
RefseqXP_016477615.10.0PREDICTED: uncharacterized protein LOC107799057
TrEMBLA0A1S4ALX60.0A0A1S4ALX6_TOBAC; uncharacterized protein LOC107799057
TrEMBLA0A1U7W6M40.0A0A1U7W6M4_NICSY; uncharacterized protein LOC104223173
STRINGXP_009772851.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.22e-22MYB_related family protein