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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf02317g00053.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
ERF |
Protein Properties |
Length: 352aa MW: 39194 Da PI: 4.4357 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf02317g00053.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 85 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdps+ r++lg+f taeeAa+a++ +++++g
Peinf101Scf02317g00053.1 85 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNTAEEAARAYDVEARRIRG 134
69*******.**********965...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MCGGAIISDY IPPNRTSRRL TAELLWGRSD LSKKSKNPSN YHSKPLRSQI VDLDDDFEAD 60 FKEFKDFSDD EDDADSSSKR KRKNQYRGIR QRPWGKWAAE IRDPSKGVRV WLGTFNTAEE 120 AARAYDVEAR RIRGNKAKVN FPDEAPVPSS RRAVKVNPQK VLPKESLDSV QPDTTVMNNL 180 RNGYYDSLGY LEEKPVAKQY GYEDGGCTSV DTGFDSFAPS AGADIYFNSD VGSNSFDCSD 240 FGWGEPCTRT PEISSVLSAA IESNEAQFVE DARPEKKLKS GPNNPVADNG NTVNELSEEL 300 SAFESEMKFL QIPYLEGNWD ASADTFLNTS ATQDGENAMD LWSFDDVPSL MG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ259596 | 0.0 | HQ259596.1 Petunia x hybrida ethylene-responsive-element-binding factor 2 mRNA, complete cds. |