PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02279g02002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 389aa    MW: 43824.3 Da    PI: 8.0019
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02279g02002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.62.4e-32251306156
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                               k+r++W++eLH+rF++a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  Peinf101Scf02279g02002.1 251 KQRRCWSQELHRRFIDALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 306
                               79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.08E-18248309IPR009057Homeodomain-like
PROSITE profilePS5129414.165248308IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.6E-29249309IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-26251306IPR006447Myb domain, plants
PfamPF002497.3E-8253304IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MGSIDPPEVS LDYKAKTYIP KTITQFLEEV SMMRNVTEKM LKIEHYVKAL EDEMNKIHAF  60
QLIVALRAES MQYKKSIVEP ILEEFMPLKK SSREDDKLEG NKDKDSREKM NWMSSVQLWN  120
NDPHSPNADM VNNKQSSKLE LKKSSPRGGD ETVLYGPFQS SKARSVGKAF APFKGCSGFP  180
AKVVRKEDKD ELHRVPGLSL CTPGIKNLED TMISGLSSKP SDNSGSFSII ASSQSNIRTG  240
SQLQQQQTAR KQRRCWSQEL HRRFIDALQQ LGGSQAATPK QIRELMQVDG LTNDEVKSHL  300
QKYRLHIRKL PNTSTNEAGL LGNLWMPQDK YGESSKHSSS QSGSPQCPFQ LEGSSRGTSM  360
TGEDSMEEED DEKFESHSWK VQESGKNDV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009782556.11e-164PREDICTED: uncharacterized protein LOC104231288
TrEMBLA0A1U7WZ171e-163A0A1U7WZ17_NICSY; uncharacterized protein LOC104231288
STRINGXP_009782556.11e-164(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.21e-36G2-like family protein