PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02191g01048.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family AP2
Protein Properties Length: 737aa    MW: 82482.8 Da    PI: 5.5926
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02191g01048.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.6e-12382438155
                       AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               s+y+GV++++++gr++A+++d  + ++  ++ k  + g ++t+++Aa+a++ a++k++g
  Peinf101Scf02191g01048.1 382 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDTEDKAARAYDLAALKYWG 438
                               78*******************333.44555535555.77***99*************98 PP
2AP235.32.8e-11515560755
                       AP2   7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Peinf101Scf02191g01048.1 515 YRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 560
                               78999*******988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.16E-14382448IPR016177DNA-binding domain
PfamPF008471.6E-9382438IPR001471AP2/ERF domain
CDDcd000182.62E-18382448No hitNo description
Gene3DG3DSA:3.30.730.101.0E-11383446IPR001471AP2/ERF domain
SMARTSM003807.3E-19383452IPR001471AP2/ERF domain
PROSITE profilePS5103217.24383446IPR001471AP2/ERF domain
PROSITE profilePS5103217.319487568IPR001471AP2/ERF domain
SMARTSM003803.7E-27514574IPR001471AP2/ERF domain
PfamPF008472.9E-6515560IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-15516568IPR001471AP2/ERF domain
CDDcd000181.70E-21516570No hitNo description
SuperFamilySSF541711.31E-14516570IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    Send to blast
MSNWLGFSLT RDFRIDNDDD DESRNEQDHQ ASRNDVNSVE EAPLSVMPLR SAGSLYCWRY  60
ENNHDMTNGS TNLDEDGPKL EDFLGCCYSN SPTHEQEIAE INVNMPPSIN QSDQELQHLG  120
REANMKIIPS GLIPYVTMSN WLGFSLTRDF RIDNDDDDES RNEQDHQASR NDVNSVEEAP  180
LSVMPLRSAG SLYCWRYENN HDMTNGSTNL DEDGPKLEDF LGCCYSNSPT HEQEIAEINV  240
NMPPSINQSD QELQHLGREA NMKIIPSGLI PYGTSTFNNL QMMVPNGQFQ NSHHEFANSN  300
NGVYGHVPFD GATSVSGFKS WLRQPAPAPL ISSAEENSPT NTYHTLSLTG ATKKRPGAVK  360
NVNGSREPAP RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCRKEGQ TRKGRQGGYD  420
TEDKAARAYD LAALKYWGPT THINFSVSII RLNTYEKELE EMKNMNRQEF VAHLRRKSSG  480
FSRGASMYRG VTSIEFKGGV LVKWQFPLIK LGKLYRHHQH GRWQARIGRV AGNKDLYLGT  540
FSTQEEAAEA YDIAAIKFRG TSAVTNFDIS RYDVKRICSS TTLIAGDLAK RSPSKDSGIC  600
NQSSFEDYNS CTPSSSSPQP ILAITNGEQL QQPADSFIDM MWSSNVADEH RQNKASSRSS  660
SSAPSPKCSG SGSGSAEMSC DFGVGLEYPQ AYYSSLEVQD HKFEDARNGN DENPPNSGRM  720
GTMDLVHPVP MFALWNQ
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2469371e-35AC246937.1 Solanum lycopersicum chromosome 3 clone HBa0033F13, complete sequence.
GenBankAC2470031e-35AC247003.1 Solanum lycopersicum chromosome 3 clone HBa0033F13, complete sequence.
GenBankHG9754421e-35HG975442.1 Solanum pennellii chromosome ch03, complete genome.
GenBankHG9755151e-35HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019231310.10.0PREDICTED: AP2-like ethylene-responsive transcription factor AIL1
SwissprotQ1PFE11e-120AIL1_ARATH; AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A314KHG90.0A0A314KHG9_NICAT; Ap2-like ethylene-responsive transcription factor ail1
STRINGXP_009763770.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87772127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-114AP2 family protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]