PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02190g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | G2-like | ||||||||
Protein Properties | Length: 220aa MW: 24966.2 Da PI: 7.8529 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 44.8 | 2.8e-14 | 3 | 33 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 e+AtPk++l+lm++kgL l+++kSHLQkYRl Peinf101Scf02190g00005.1 3 ERATPKSVLRLMGLKGLNLYQLKSHLQKYRL 33 79****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.9E-13 | 2 | 34 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.7E-9 | 3 | 34 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 3.23E-5 | 3 | 36 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 2.1E-20 | 79 | 124 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MGERATPKSV LRLMGLKGLN LYQLKSHLQK YRLGQQAKKQ NAADQNKENS GDSSGQFSLH 60 LSGPSTSSLN MNYMQGGVPI SEAVMSQIEV QKRLQEQLEV QQKLQMRIEA QDKYLQAMLE 120 KAQKNIPVSM NSPSALEATR AQHFNLPLSN ITDHMHGDNM DDNIMGQRIY DNTNEELPKS 180 DYFKEEDQKR YMNLKLKEVS ITFDLNSRSS YDFFGANAAV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019247845.1 | 1e-111 | PREDICTED: myb family transcription factor PHL11 isoform X1 | ||||
Refseq | XP_019247847.1 | 1e-111 | PREDICTED: myb family transcription factor PHL11 isoform X3 | ||||
TrEMBL | A0A1J6ID59 | 1e-109 | A0A1J6ID59_NICAT; Myb family transcription factor phl11 | ||||
STRING | XP_009769428.1 | 1e-101 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4416 | 21 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 1e-24 | G2-like family protein |