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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02160g03024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bHLH | ||||||||
Protein Properties | Length: 91aa MW: 10159.4 Da PI: 5.5559 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.9 | 7.7e-08 | 14 | 55 | 14 | 54 |
HHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 d+iN+ +L++llP++s+++++ + + iLe++++YI++L Peinf101Scf02160g03024.1 14 DEINDLVLNLQSLLPNSSSGQCTSrVAASKILEETCNYIRML 55 78**************878888888***************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.347 | 1 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-8 | 13 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.5E-7 | 13 | 70 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.0E-5 | 14 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence Send to blast |
MSSRRRSNSR FSQDEINDLV LNLQSLLPNS SSGQCTSRVA ASKILEETCN YIRMLHSEVD 60 DLSERLSQIL ASVDTNTHVG LVDTLISLLQ H |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009773320.1 | 8e-37 | PREDICTED: transcription factor ILI5-like | ||||
TrEMBL | A0A1U7WGE9 | 2e-35 | A0A1U7WGE9_NICSY; transcription factor ILI5-like | ||||
STRING | XP_009773320.1 | 3e-36 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA353 | 24 | 161 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26945.1 | 7e-16 | bHLH family protein |