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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf02135g00018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | MYB_related | ||||||||
Protein Properties | Length: 208aa MW: 23571.2 Da PI: 5.0945 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.3 | 3.1e-07 | 14 | 41 | 1 | 27 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktI 27 rg W+++Ede+l+++ ++G+g +W t Peinf101Scf02135g00018.1 14 RGQWSPDEDEILKNYLLKHGTGgNWITL 41 89********************999765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.7E-9 | 5 | 39 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.38E-5 | 8 | 42 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.249 | 9 | 38 | IPR017877 | Myb-like domain |
CDD | cd00167 | 0.00956 | 17 | 38 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MGRTPCCDKN KVKRGQWSPD EDEILKNYLL KHGTGGNWIT LPLRAEEEKQ APYSLMQFPF 60 PYLDSAELSI NTNNIDQKHF PIPSFTQENS KNSGTSSVSF DETNDFAWFE KGANDSFEGF 120 PLGFSTDEIM DAYVFGILIY SFITQYSEIA NAPTSNLLLI LHASPRIQRD DGREARFPRD 180 RIHQIFTMSS GGSVNCRRHQ KEGSGQES |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15590 | 5 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23000.1 | 1e-17 | myb domain protein 37 |