 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Peinf101Scf02122g01022.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 167aa MW: 19087 Da PI: 9.9497 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf02122g01022.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.2 | 9.6e-51 | 14 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
ppG+rFhP+deel+v+yL +kv++++l++ +i+ev++y+++PwdLp+ + +e+ew+fFs+rd+ky++g r+nr+t+sgyWkat
Peinf101Scf02122g01022.1 14 PPGVRFHPSDEELIVHYLLNKVNSHPLPA-AIIAEVELYNYNPWDLPRLALFGEDEWFFFSPRDRKYPNGVRPNRTTSSGYWKAT 97
9****************************.88***************76667899****************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g+dk++ls+ g+ +g+kk Lvfy+g+apkg+ktdW+m eyrl
Peinf101Scf02122g01022.1 98 GTDKPILSSIGSRIGVKKALVFYTGKAPKGVKTDWIMIEYRL 139
*********99*****************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MAPFETPLSS FHFPPGVRFH PSDEELIVHY LLNKVNSHPL PAAIIAEVEL YNYNPWDLPR 60
LALFGEDEWF FFSPRDRKYP NGVRPNRTTS SGYWKATGTD KPILSSIGSR IGVKKALVFY 120
TGKAPKGVKT DWIMIEYRLP DRAIQPSRSA VSMRVSLIIN HLLFLNQ
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-62 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility. {ECO:0000269|PubMed:22278768}. |
| UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought, salt and cold treatments. {ECO:0000269|PubMed:18813954}. |
