PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02016g05006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 259aa    MW: 29049.3 Da    PI: 7.254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02016g05006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09102148455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h + Er+RR+++ + f  L ++lP       kKl+K++ L  A++Y+k+L+
  Peinf101Scf02016g05006.1 102 DHIISERKRREKLSQLFIALSKVLPGI-----KKLDKVSLLGDAIKYMKELE 148
                               59999********************97.....7****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.56498147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-13102161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-7103148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.58E-10103152No hitNo description
SuperFamilySSF474593.79E-15103166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-11104153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MTNNSMDENL VIDDLSAVLT EFYSPMTTVQ ESEFTYNTEE TSQQKILPPS SCQIFSFGNS  60
HLSPAAHEVI TAKNIMYNSH EDNGVHASSG LPSMRAPIQV KDHIISERKR REKLSQLFIA  120
LSKVLPGIKK LDKVSLLGDA IKYMKELEER KRILEEEMKK TSVKLSFNSS AFDEISTNQG  180
NSYGHLKERT AEIKAKIVYN NVLIKIQCSK QSGIVARIPC EMEKLNLAIH DIRILPFGHT  240
ALDISILAES RSVEPAVRA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111ERKRRE
2107112RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88641628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.13e-29bHLH family protein