PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01889g11041.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 237aa MW: 26620.4 Da PI: 6.5703

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01889g11041.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.0002	173	209	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ +++ L +l+ + +K + a++L +A+ YI+ Lq Peinf101Scf01889g11041.1 173 EKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 209 56678888899998887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.16	159	208	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.06E-10	170	223	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.21E-6	171	213	No hit	No description
Gene3D	G3DSA:4.10.280.10	7.1E-9	173	224	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
MAGNPTNWWN MLMNGNMHPQ SQEQLSSSTS SNFYGASNSL AENPSQDIPR SWSQLLLPFH 60 QENLEDQSLN SVHPSTNFKV PVADVKPELG QLYGYHHRVE NEFQSSLQEK LELPTNFTNH 120 ATSWSHQDMP SPASSCITTG LNHNVLNFSS NKTSKEEHKN QHPADHSSEV RKEKLGDRIT 180 ALHQLVSPFG KTDTASVLSE AIGYIRFLQG QIQDSQHKEK DLRSRGLCLV PISCMQN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009608011.1	1e-107	PREDICTED: transcription factor bHLH68-like isoform X1
TrEMBL	A0A1S4A576	1e-104	A0A1S4A576_TOBAC; transcription factor bHLH68-like isoform X1
STRING	XP_009608011.1	1e-106	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1519	22	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	3e-26	bHLH family protein