PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01853g07007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 330aa MW: 36960.9 Da PI: 7.0565 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.6 | 4.3e-35 | 54 | 199 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.........vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrkn 75 lp+G++F+Ptd+el+ e+L++kv ++e ++ +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+ Peinf101Scf01853g07007.1 54 LPAGVKFDPTDQELI-EHLEAKVLLANIESKShplidefipTIEGEdGICYTHPEKLP-GVTRDGLNRHFFHRPSKAYTTGTRKR 136 799************.99****99999655445666665544776646**********.555667799***************** PP NAM 76 ra.........tksgyWkatgkdkevlskkgelvglkktLvfyk..grapkgektdWvmheyrl 128 r+ + +W++tgk+++v++ +g+++g+kk+Lv+yk g+++k+ekt+Wvmh+y+l Peinf101Scf01853g07007.1 137 RKiqtecddlqGGETRWHKTGKTRPVIV-NGKQKGCKKILVLYKnfGKNRKPEKTNWVMHQYHL 199 *756555554433778************.999***********7346999999*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 18 | No hit | No description |
SuperFamily | SSF101941 | 4.32E-39 | 49 | 218 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.956 | 54 | 218 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.9E-16 | 55 | 199 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence Send to blast |
MIKSISNTHQ LGSISSSCDL IDAKLEEHQL AGGSNLQCPC CGHKLERKPD WVGLPAGVKF 60 DPTDQELIEH LEAKVLLANI ESKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLNRH 120 FFHRPSKAYT TGTRKRRKIQ TECDDLQGGE TRWHKTGKTR PVIVNGKQKG CKKILVLYKN 180 FGKNRKPEKT NWVMHQYHLG HHEEETEGEL VVSKIFYQTQ PRQCSSKEMN IPCHGDELSV 240 AVCGAMSSYS TMDIQQLKAD NFGFLPFEKS SEAGITVADD PISTTALHIS RPSSSISAIM 300 DQPNLHHTSV ILEKDSFHVP GIILPHEHFQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006338197.1 | 1e-169 | PREDICTED: uncharacterized protein LOC102578141 isoform X2 | ||||
Swissprot | Q9M0F8 | 1e-128 | NAC75_ARATH; NAC domain-containing protein 75 | ||||
TrEMBL | M1BES7 | 1e-167 | M1BES7_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400043521 | 1e-168 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4057 | 24 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-120 | NAC domain containing protein 75 |
Publications ? help Back to Top | |||
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