PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01807g00007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 273aa    MW: 30258.2 Da    PI: 6.254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01807g00007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.1e-1484131355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h ++ErrRR+r  + f+ L + +P +     kKl+Ka+iLe  ++YI +Lq
  Peinf101Scf01807g00007.1  84 QDHLMAERRRRERFSQLFAALAKTIPGL-----KKLDKASILEDSIKYIEQLQ 131
                               67999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.28881130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-1184131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1585140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-1586141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.77E-1286135No hitNo description
SMARTSM003538.8E-1487136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
SSLEHGNTIV KEALRVGFPS SPSSTSSNSS SSSHNMISFG NPAESNYFLG DEQDYCMMSV  60
EKVMTLSSST SLPKRISRSP LQSQDHLMAE RRRRERFSQL FAALAKTIPG LKKLDKASIL  120
EDSIKYIEQL QERVRALEEA GTKKNLNIES TATLKQSLAA ISDDNTNFLT YKDIADDCSM  180
KSNPENEIQV QILDKNVLIG IHCSNSRRNI FSLIAGTMEK LHLTIHNIRV TPCNNTAVNI  240
AILSQIDQNV DIRVEDLEKA LELALLSTPN ATD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18994ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019249041.16e-95PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1J6IQ151e-93A0A1J6IQ15_NICAT; Transcription factor bhlh18
STRINGXP_009623662.11e-90(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125981122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.23e-29bHLH family protein