PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01804g00027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | FAR1 | ||||||||
Protein Properties | Length: 383aa MW: 42271.8 Da PI: 5.4561 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 25.5 | 4.3e-08 | 96 | 174 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +f++e+A++ GFsv+k++ kk +g++ + f C ++ k+++++++ +r++C a ++ kdg+ +++ ++H Peinf101Scf01804g00027.1 96 EFFKEHARSKGFSVVKRSRKKD-VSGRVSNVLFSCDMSRKSTSKNRT----------KRIQCPAIVTGIVGKDGNCIDSTVCTNH 169 6**************9987776.8999**********9998887665..........9999999998888878888778888999 PP FAR1 86 nHela 90 Hel Peinf101Scf01804g00027.1 170 FHELD 174 99886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08510 | 1.5E-32 | 263 | 380 | IPR013717 | PIG-P |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence Send to blast |
MESNSTDMNT TNIDTLNNVL GLSQDDSLLN EGVEMSISSG GNFSSGMDVD GVGEHTSSEG 60 CSDGEQKETA DQFTEEDLLV CPRPGMLFSS AVSMFEFFKE HARSKGFSVV KRSRKKDVSG 120 RVSNVLFSCD MSRKSTSKNR TKRIQCPAIV TGIVGKDGNC IDSTVCTNHF HELDPSLSRL 180 MAGHRSMDRS LERTLIAQDK AGLKVSKNIR VVQVLSGWED PRSVNSPRRI LSFSKNRKAT 240 VFFPDSDDRG SGFGVSGDQG PKTSEVYGFV GSITTVVATV LFLVWAYLPE KWLHSLGIVY 300 YPSRYWALAV PAYAMMTIVL AIGFYIGLNF LATPPPTSFS MIYDEFTREP LTSCPSIDDD 360 EQPIEPISDI RIDHINNLMF NPK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT013258 | 0.0 | BT013258.1 Lycopersicon esculentum clone 134793F, mRNA sequence. |