PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01786g04007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 342aa    MW: 38369.6 Da    PI: 9.7427
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01786g04007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.68.2e-1936128186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf..erspkqCkekwenlnkrykkikegekk....rtsessst 78 
                               +W+++e+ aLi+a+r+++ +lrrg+l++++W+ev++ +  + ++   ++++qC++k+e+l+kry+ + +++      r+ +  s+
  Peinf101Scf01786g04007.1  36 CWSHDETAALIDAYRKKWYSLRRGNLRANHWQEVADDVfTRCPIdpPKTAVQCRHKMEKLRKRYRTEIQRAAPyggvRSHRYCSS 120
                               8*************************************7444444489*****************99988764111135566678 PP

                  trihelix  79 cpyfdqle 86 
                               +++f++++
  Peinf101Scf01786g04007.1 121 WVHFKRMD 128
                               88898887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.2E-2035130No hitNo description
PROSITE profilePS500906.43796IPR017877Myb-like domain
SMARTSM005958.1E-944135IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEAQTFSTTP PPPPQLPSPN NVTVAVSSSR RLPPPCWSHD ETAALIDAYR KKWYSLRRGN  60
LRANHWQEVA DDVFTRCPID PPKTAVQCRH KMEKLRKRYR TEIQRAAPYG GVRSHRYCSS  120
WVHFKRMDDM EKGPNNDNVG SSDDEGHEDN VDDYRQNSVK LSNLYGNNNV VSSTMNRSSS  180
YQGVVSNGGG GFRIRIPGMP GIAAQTAAPL PMAKPYTNSR VEDIGVENPN NYYGSSNKMF  240
RADIMGKRVV GEGGGVGGVG EKKKGDSMGE IVAAIKVLGD GFVRMERMKM DMARELEERR  300
MEMEIKKTEM ILESQQRIVE AFAQALSEKK HKKAKRMPIP EC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544457.11e-155PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A2G3DIW11e-154A0A2G3DIW1_CAPCH; Uncharacterized protein
STRINGPGSC0003DMT4000042691e-154(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80282327
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-46Trihelix family protein