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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Peinf101Scf01786g04007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
Trihelix |
Protein Properties |
Length: 342aa MW: 38369.6 Da PI: 9.7427 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf01786g04007.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 59.6 | 8.2e-19 | 36 | 128 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf..erspkqCkekwenlnkrykkikegekk....rtsessst 78
+W+++e+ aLi+a+r+++ +lrrg+l++++W+ev++ + + ++ ++++qC++k+e+l+kry+ + +++ r+ + s+
Peinf101Scf01786g04007.1 36 CWSHDETAALIDAYRKKWYSLRRGNLRANHWQEVADDVfTRCPIdpPKTAVQCRHKMEKLRKRYRTEIQRAAPyggvRSHRYCSS 120
8*************************************7444444489*****************99988764111135566678 PP
trihelix 79 cpyfdqle 86
+++f++++
Peinf101Scf01786g04007.1 121 WVHFKRMD 128
88898887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MEAQTFSTTP PPPPQLPSPN NVTVAVSSSR RLPPPCWSHD ETAALIDAYR KKWYSLRRGN 60 LRANHWQEVA DDVFTRCPID PPKTAVQCRH KMEKLRKRYR TEIQRAAPYG GVRSHRYCSS 120 WVHFKRMDDM EKGPNNDNVG SSDDEGHEDN VDDYRQNSVK LSNLYGNNNV VSSTMNRSSS 180 YQGVVSNGGG GFRIRIPGMP GIAAQTAAPL PMAKPYTNSR VEDIGVENPN NYYGSSNKMF 240 RADIMGKRVV GEGGGVGGVG EKKKGDSMGE IVAAIKVLGD GFVRMERMKM DMARELEERR 300 MEMEIKKTEM ILESQQRIVE AFAQALSEKK HKKAKRMPIP EC
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