PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01775g01023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 549aa    MW: 59467.4 Da    PI: 6.1515
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01775g01023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67e-30230287260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               +DgynWrKYGqK v+g+ef+rsYY+Ct+++C +kk+vers+ d+++++++Y g+H+h+k
  Peinf101Scf01775g01023.1 230 EDGYNWRKYGQKLVRGNEFTRSYYKCTYSNCLAKKQVERSH-DGHITDVHYIGKHEHPK 287
                               7****************************************.***************85 PP
2WRKY102.82e-32406463259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dg++WrKYGqK vkg+++prsYYrC+sagCpvkk+ver+++dpk+v++tYeg+H h+
  Peinf101Scf01775g01023.1 406 NDGHRWRKYGQKFVKGNPNPRSYYRCSSAGCPVKKHVERASHDPKLVITTYEGQHVHD 463
                               8*******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-25223287IPR003657WRKY domain
PROSITE profilePS5081121.586224288IPR003657WRKY domain
SuperFamilySSF1182901.57E-23228286IPR003657WRKY domain
SMARTSM007741.6E-32229287IPR003657WRKY domain
PfamPF031063.7E-23230286IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-34391464IPR003657WRKY domain
SuperFamilySSF1182902.62E-28397464IPR003657WRKY domain
PROSITE profilePS5081134.084400465IPR003657WRKY domain
SMARTSM007744.1E-38405464IPR003657WRKY domain
PfamPF031063.7E-26406462IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MGTPREEASG EVSSENLQQK PDPEPATNKS ELKEKGSCAS MSDDGVSGEP QKRLSPDVDT  60
QASKSNQEES AHPSTCQEVS NKIQLSQCDE GVSVSQSNQE NISLSGIQEK ESENVPQKQS  120
LESKGDASVC SQLPILPEDL DAKSYGSESG VNNKAISLSP GKASDSLSQI KSQDIELIVS  180
QSDQQIMTYS IGPEKALDKL QPRRNPDTSA LGLPSDQGST PSRALEKPSE DGYNWRKYGQ  240
KLVRGNEFTR SYYKCTYSNC LAKKQVERSH DGHITDVHYI GKHEHPKSLT GPRIAPDMAL  300
PLEMRQLDMP IITTSEGEKS TAPGETCQPS KPSEAQRPRE IVSGGGGVKV TPLKPHKSED  360
KVDKDGGPES KRQKKDIAIA EDTPPIKSHS EPRHIVQTVS EVDIINDGHR WRKYGQKFVK  420
GNPNPRSYYR CSSAGCPVKK HVERASHDPK LVITTYEGQH VHDTMPTSRT AGQITAGPDA  480
STTGVSGESR FESDENKHVG ESKSESGGNK HVGESISESG GNKHVGESKS ESGENKHVGL  540
DMVVDIGAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-31231466275WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775525.10.0PREDICTED: probable WRKY transcription factor 20 isoform X2
RefseqXP_009775526.10.0PREDICTED: probable WRKY transcription factor 20 isoform X2
RefseqXP_016484261.10.0PREDICTED: probable WRKY transcription factor 20 isoform X4
RefseqXP_016484262.10.0PREDICTED: probable WRKY transcription factor 20 isoform X4
TrEMBLA0A1S4B5Y80.0A0A1S4B5Y8_TOBAC; probable WRKY transcription factor 20 isoform X4
TrEMBLA0A1U7WMN60.0A0A1U7WMN6_NICSY; probable WRKY transcription factor 20 isoform X2
STRINGXP_009775524.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.13e-73WRKY family protein