PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

TALE

Protein Properties

Length: 761aa MW: 83565.4 Da PI: 6.8774

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01659g01016.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.7e-09	540	577	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Peinf101Scf01659g01016.1 540 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 577 664459******************************88 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	3.1E-79	331	470	IPR006563	POX domain
Pfam	PF07526	4.4E-52	336	469	IPR006563	POX domain
PROSITE profile	PS50071	12.568	518	581	IPR001356	Homeobox domain
CDD	cd00086	1.32E-12	521	582	No hit	No description
SMART	SM00389	1.2E-9	521	585	IPR001356	Homeobox domain
SuperFamily	SSF46689	3.59E-17	523	588	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	9.1E-29	524	587	IPR009057	Homeodomain-like
Pfam	PF05920	3.8E-18	538	577	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence Send to blast
MGIASTPPRP YVTSHNSKGD NSIIHQVLEK ANSMSQDYHH QSLFNFSNGF ERSQAEQQQQ 60 QQQQHHMAQQ IRRDKLRVQG FDPPPFEEEE ASGLPVYHET AGMLSEMFNF PPGTVTTATT 120 ELLESQFNQN FRHPNQNPRS QPATGMGSEW FGSRQGMIVG AASHQQVPLG YGKNHNNQIS 180 SAINVADSAA AMQLFLMNPP QPRSPSSPSP SSHHHHNNPP STLHMLLPNP SSTSTLQGFP 240 NPGEGSFGQF TTHLTTPNEI GGINVVESQG LSLSLSSSLQ HLDATKESEM LFFNQGGSNS 300 GQFRYKNLSI GGEGVSQNNL QQVHVGYGSS LGVVNVLRNS KYAKAAQELL EEFCSVGRGK 360 FKKSNNKAAT NPNTNNPSGG GGNNNTSSSS SKDVPPLSAA DRIEHQRRKV KLLSMLDEAH 420 RRYNHYCEQM QMVVNSFDLV MGFGAAVPYT ALAQKAMSRH FRCLKDAIAA QLKHSCELLG 480 EKDAGTSGIT KGETPRLKML EQSLRQQRAF HQMGMMEQEA WRPQRGLPER SVNILRAWLF 540 EHFLHPYPSD ADKHLLARQT GLSRNQVSNW FINARVRLWK PMVEEMYQQE AKEEDDDEDE 600 KSQSPNSGHG INSTNAQTPT PNSSSTNIMT TTTTAAATET VTAATVITTT TTTASTIVNK 660 RSEINALHEN DPSLIAINSH ISTTFSENQA SSNFPTIIHD PSDCRRGNFP GEDYAADDVG 720 STMIRFGTST TTTTGDVSLT LGLHHAGNLP ENNNSNTHFF G

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence Send to blast

MGIASTPPRP YVTSHNSKGD NSIIHQVLEK ANSMSQDYHH QSLFNFSNGF ERSQAEQQQQ  60
QQQQHHMAQQ IRRDKLRVQG FDPPPFEEEE ASGLPVYHET AGMLSEMFNF PPGTVTTATT  120
ELLESQFNQN FRHPNQNPRS QPATGMGSEW FGSRQGMIVG AASHQQVPLG YGKNHNNQIS  180
SAINVADSAA AMQLFLMNPP QPRSPSSPSP SSHHHHNNPP STLHMLLPNP SSTSTLQGFP  240
NPGEGSFGQF TTHLTTPNEI GGINVVESQG LSLSLSSSLQ HLDATKESEM LFFNQGGSNS  300
GQFRYKNLSI GGEGVSQNNL QQVHVGYGSS LGVVNVLRNS KYAKAAQELL EEFCSVGRGK  360
FKKSNNKAAT NPNTNNPSGG GGNNNTSSSS SKDVPPLSAA DRIEHQRRKV KLLSMLDEAH  420
RRYNHYCEQM QMVVNSFDLV MGFGAAVPYT ALAQKAMSRH FRCLKDAIAA QLKHSCELLG  480
EKDAGTSGIT KGETPRLKML EQSLRQQRAF HQMGMMEQEA WRPQRGLPER SVNILRAWLF  540
EHFLHPYPSD ADKHLLARQT GLSRNQVSNW FINARVRLWK PMVEEMYQQE AKEEDDDEDE  600
KSQSPNSGHG INSTNAQTPT PNSSSTNIMT TTTTAAATET VTAATVITTT TTTASTIVNK  660
RSEINALHEN DPSLIAINSH ISTTFSENQA SSNFPTIIHD PSDCRRGNFP GEDYAADDVG  720
STMIRFGTST TTTTGDVSLT LGLHHAGNLP ENNNSNTHFF G

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3k2a_A	2e-16	527	585	5	63	Homeobox protein Meis2
3k2a_B	2e-16	527	585	5	63	Homeobox protein Meis2
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AF406699	0.0	AF406699.1 Solanum tuberosum BEL1-related homeotic protein 13 (Bel13) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009776283.1	0.0	PREDICTED: BEL1-like homeodomain protein 2
Swissprot	Q9SW80	1e-171	BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBL	A0A2G2XIM2	0.0	A0A2G2XIM2_CAPBA; BEL1-like homeodomain protein 4
STRING	XP_009776283.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3341	21	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-151	BEL1-like homeodomain 2

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]