PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01632g07037.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 396aa    MW: 44534.1 Da    PI: 5.0539
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01632g07037.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.82.8e-25222280259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D+++WrKYGqK+++g+++pr+YYrC++   C ++k +ers +dp+++++   geH he
  Peinf101Scf01632g07037.1 222 NDKWAWRKYGQKPIRGTPYPRNYYRCSTDkYCIARKYLERSPRDPSLFIVSLYGEHSHE 280
                               8*************************99989***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-25211282IPR003657WRKY domain
PROSITE profilePS5081128.667216282IPR003657WRKY domain
SuperFamilySSF1182901.7E-22218282IPR003657WRKY domain
SMARTSM007741.2E-27221281IPR003657WRKY domain
PfamPF031062.5E-20222279IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MGDNNWDLGA VVRKWNNRPT RDNTNNVGTE PVVPSLGLES VTFEKDDDWF NDYLSAIDDD  60
SSDTFEGLSL MFSSDDFPVV QQQTPVIQSP NSIITNPTSF PIAVDVLKDQ NETQPQLLQP  120
IQTALLSQQM FPPPPPPPPP PPPAVAVSAP APQQMIPRRK PGRPPKRAKV FPSVTVPVAR  180
NSRVIKTRKR SLMCEDDSPL SYRKNSPLLK VVREMTYDEL LNDKWAWRKY GQKPIRGTPY  240
PRNYYRCSTD KYCIARKYLE RSPRDPSLFI VSLYGEHSHE PPANINSLSG STRSTKSIKD  300
LSTVPDPTPS SYSSPSPVSG SSFSPVSPMT PMFDTESALP NKNHMMEQAE EEENKGGNEE  360
EKIDLIPNDF MIEDIFMSFE ELNGFAYNNY GKGRFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-16211282474WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016484380.12e-81PREDICTED: probable WRKY transcription factor 27
TrEMBLA0A1S4B6034e-80A0A1S4B603_TOBAC; probable WRKY transcription factor 27
STRINGXP_009630404.19e-81(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36681345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.12e-31WRKY family protein