PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01632g03025.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 347aa    MW: 38612.3 Da    PI: 5.9849
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01632g03025.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.46.9e-29130191159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDg++WrKYGqK++ g+++pr+YYrCt +   gC ++k+v+rs+edp+++e+tY+g+H+++
  Peinf101Scf01632g03025.1 130 LDDGFSWRKYGQKDILGAKYPRGYYRCTLRhvqGCLATKQVQRSDEDPTTFEVTYRGRHTCN 191
                               59**************************988889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.055125188IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-27127191IPR003657WRKY domain
SuperFamilySSF1182901.22E-25129192IPR003657WRKY domain
SMARTSM007741.6E-40130192IPR003657WRKY domain
PfamPF031062.8E-26131190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0010193Biological Processresponse to ozone
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MDNTYGTDNG EFNRLVNELT QGRDLVQQLQ LHLNTPYSCS PETTRDFLLH NIQSKFDKAL  60
SLLNSSNSTI VPNLGMSDSP GSLTASPPHS EDSDRDLEPK DFATRKRKSS TPRWTKQVQV  120
CPGAPIEGTL DDGFSWRKYG QKDILGAKYP RGYYRCTLRH VQGCLATKQV QRSDEDPTTF  180
EVTYRGRHTC NQGGGAIANN MTPTAPVTIP QNQEPNNLGA GLGNEHQQLM SVSREILHNF  240
QKDLNISKDD FNFNTPNNMP FASFASSSDI NADQDYSYVP HNAMIPNNSF VENLSPAYNM  300
SSGTNSGSSS YFAMTSSQMK QHGSHDYQYN SMGYESNFPF DYQGSSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-19130190868OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103108TRKRKS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00525DAPTransfer from AT5G24110Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754422e-35HG975442.1 Solanum pennellii chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019239237.11e-161PREDICTED: probable WRKY transcription factor 30
TrEMBLA0A1J6JVL11e-160A0A1J6JVL1_NICAT; Putative wrky transcription factor 41
STRINGXP_009801586.11e-155(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117431922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-50WRKY DNA-binding protein 30