PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01617g01028.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 348aa MW: 38786.1 Da PI: 4.8015

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01617g01028.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.4	1.5e-09	274	314	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ +L+ l+P+ +K++ +++Le+Av Y+k Lq Peinf101Scf01617g01028.1 274 RKRRERINERLKTLQCLIPNG-----TKVDISTMLEEAVLYVKFLQ 314 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	8.11E-13	264	330	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.469	264	313	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.4E-11	269	328	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	9.5E-10	270	319	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.88E-10	273	318	No hit	No description
Pfam	PF00010	6.3E-7	274	314	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence Send to blast
MEPLGAMSEG EWRSLSGMCS ADEEDAFMAQ LLGNCSLPNE LRNISNFGVS SSFWTGHEST 60 TNMEGGREVS VFSSNDTNNS MYDGGSSFLC PVSSQEGYYP CHSKPILMRN DSSITMEYGQ 120 VEGQSLGSSS HDVFPYNQVE AADFLNQDVS NDSMEFDEHI PESVLDGQGL QLGRTDYDQF 180 PEDNMDDGPS ESSKKRSRLQ GHGHVPKSKR SPKLQKDSKI GIEMDRKNKA VLQRQNSMIS 240 CCSEDESNVS HELSGRKTRA SRGSATDPQS LYARKRRERI NERLKTLQCL IPNGTKVDIS 300 TMLEEAVLYV KFLQLQIKLL SSDDHWMYAP IAYNGMDIGL DLRIGLPK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence Send to blast

MEPLGAMSEG EWRSLSGMCS ADEEDAFMAQ LLGNCSLPNE LRNISNFGVS SSFWTGHEST  60
TNMEGGREVS VFSSNDTNNS MYDGGSSFLC PVSSQEGYYP CHSKPILMRN DSSITMEYGQ  120
VEGQSLGSSS HDVFPYNQVE AADFLNQDVS NDSMEFDEHI PESVLDGQGL QLGRTDYDQF  180
PEDNMDDGPS ESSKKRSRLQ GHGHVPKSKR SPKLQKDSKI GIEMDRKNKA VLQRQNSMIS  240
CCSEDESNVS HELSGRKTRA SRGSATDPQS LYARKRRERI NERLKTLQCL IPNGTKVDIS  300
TMLEEAVLYV KFLQLQIKLL SSDDHWMYAP IAYNGMDIGL DLRIGLPK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019233912.1	1e-179	PREDICTED: transcription factor bHLH139-like
TrEMBL	A0A1J6KZP5	1e-177	A0A1J6KZP5_NICAT; Transcription factor bhlh84
STRING	XP_009602073.1	1e-178	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	2e-55	bHLH family protein