 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf01611g02014.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
NAC |
| Protein Properties |
Length: 292aa MW: 33701.4 Da PI: 10.3915 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf01611g02014.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 94.2 | 2.1e-29 | 5 | 78 | 53 | 127 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ +g+k+tLvf++grapkg++t+W+mhey
Peinf101Scf01611g02014.1 5 ESDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-GSNMIGTKRTLVFHTGRAPKGQRTQWIMHEYC 78
5689**************************************.99*****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009626 | Biological Process | plant-type hypersensitive response |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0034976 | Biological Process | response to endoplasmic reticulum stress |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005783 | Cellular Component | endoplasmic reticulum |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
KSIVESDNEW FFFSPRGRKY PNGSQSKRAT ESGYWKATGK ERNVKSGSNM IGTKRTLVFH 60
TGRAPKGQRT QWIMHEYCKT GNSYVEDSMV VCRLRKNNEF HLNDTPGSRR NHLATTETKE 120
GTSSFSSHLV EKIESGSESD KLTKELPHHH SSSFWKDFDE EDCFADIMKD DIIKLDDSSY 180
KARNNNLLPI ITRKLESPTK SSTWEAQNVM SHRLPFQGTA NRRLRLQKER APRRVERSEA 240
VEANKKKNHA VSISRRLIDI KPVKMMKHWS IPLFLVSLML LVIFLCLFGV PQ
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swm_B | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swm_C | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swm_D | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swp_A | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swp_B | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swp_C | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| 3swp_D | 1e-25 | 6 | 96 | 72 | 167 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975450 | 1e-94 | HG975450.1 Solanum pennellii chromosome ch11, complete genome. |
