PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01602g02010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 345aa    MW: 38895.7 Da    PI: 6.5173
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01602g02010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.25.9e-27140200259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               dD y+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+ + +++e+tY+g+H ++
  Peinf101Scf01602g02010.1 140 DDVYSWRKYGQKDILGANHPRAYYRCTHRntqGCLATKQVQRSDVNSSIFEVTYKGRHSCK 200
                               8***************************98889*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-27126201IPR003657WRKY domain
PROSITE profilePS5081122.687134202IPR003657WRKY domain
SuperFamilySSF1182905.36E-24138201IPR003657WRKY domain
SMARTSM007741.1E-37139201IPR003657WRKY domain
PfamPF031061.3E-24140200IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MEKVKALEKK KLINELTQGR EFVNQLKKQL SPLASSPQES DLLVGKILSS LEKSLSILNL  60
KALILEGGNA NSTSSCSSIS VPENGIMSFL GNNNSPKSEV LDSSNDHLLG KNMISKKRKI  120
SQKWTKQVSF SATGLEGPHD DVYSWRKYGQ KDILGANHPR AYYRCTHRNT QGCLATKQVQ  180
RSDVNSSIFE VTYKGRHSCK VAQSEIFPLE NQKQKQNKKQ KQELGYQRQE QEMVLHNYGP  240
NLKVENFSLT KEEVFTPFSF PPTTPLNPEN IEETQLFSNS MEPFSLLTTQ NEEFGMDHIL  300
HSSESDLTEL ISTPTSISNS PFCADWDLAV DFEPSVTFDI SEFFN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-181411981875Disease resistance protein RRS1
5w3x_D1e-181411981875Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ8087551e-134KJ808755.1 Nicotiana tabacum WRKY transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628746.10.0PREDICTED: probable WRKY transcription factor 41
RefseqXP_016464337.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A1S3ZJ621e-179A0A1S3ZJ62_TOBAC; probable WRKY transcription factor 41
STRINGXP_009628746.11e-180(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-42WRKY family protein