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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf01574g02001.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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| Family |
LBD |
| Protein Properties |
Length: 293aa MW: 31735.4 Da PI: 8.6586 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf01574g02001.1 | genome | SGN | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 121.7 | 3.9e-38 | 57 | 153 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
aCaaCk++rr+Ca+dC+lapyfpae++k+f n+hklFG+sn+lk+lk++++ ++++am++l+ eA++ra+dPv G+++vil+l++
Peinf101Scf01574g02001.1 57 ACAACKYQRRRCAPDCPLAPYFPAERQKDFLNAHKLFGVSNILKVLKNVSPCQKDNAMKALILEANIRADDPVGGCYRVILNLHR 141
7************************************************************************************ PP
DUF260 86 qleqlkaelall 97
q++ +++l+++
Peinf101Scf01574g02001.1 142 QINYCQSQLQHV 153
******999876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MKNVNNTQNI SSSSTPPVIS SSPTASAAPA PIRSNHRNRV ASGGGSSSGS SGNGSQACAA 60
CKYQRRRCAP DCPLAPYFPA ERQKDFLNAH KLFGVSNILK VLKNVSPCQK DNAMKALILE 120
ANIRADDPVG GCYRVILNLH RQINYCQSQL QHVYRDLFRV QAATLQEQQN NINATAVSIR 180
GNSYSTMSFD MLPLHSLHGF NVSNSISIGE EGSSSTQIVK GNGVEGFSSD EDFEDKTMVT 240
SSNGKQPIVE FEDIKSSFES IDDFKGKGDD FKGKGVATYL SDDKVVSKAR RVN
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