PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01468g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 160aa    MW: 18705 Da    PI: 9.4248
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01468g00030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.93e-2754140190
                      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                               kfY +YA++ GFsvr+ + +ks+++++i+ ++fvCskeg+r++++ +   ++r+r +tr  Ck  l v+k+++g+w+v +l++eH
  Peinf101Scf01468g00030.1  54 KFYLDYAHRNGFSVRRGRITKSRKDKSIIGQEFVCSKEGFRRKKNLE---SNRPRDVTRERCKVLLYVSKKEEGNWVVCRLVSEH 135
                               6*****************************************98777...999******************************** PP

                      FAR1  86 nHela 90 
                               nHela
  Peinf101Scf01468g00030.1 136 NHELA 140
                               ***97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-2454140IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MENSNLDEQN IKGVEVRLEE SDMDGPEQAP YVGVENSREP YIGMDFQSLD DSFKFYLDYA  60
HRNGFSVRRG RITKSRKDKS IIGQEFVCSK EGFRRKKNLE SNRPRDVTRE RCKVLLYVSK  120
KEEGNWVVCR LVSEHNHELA SPNSQKFLRS KRKNGLDSIR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015167012.11e-77PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A3Q7EE032e-64A0A3Q7EE03_SOLLC; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA645860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-24FAR1-related sequence 5