PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf01452g03021.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 273aa MW: 31230.9 Da PI: 6.1786

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01452g03021.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.5e-14	104	155	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + h+e+Er+RR+++ s ++ Lr+llP ++K s ++ +Av+YI +Lq Peinf101Scf01452g03021.1 104 KIIHKEIERQRRQEMSSLYASLRQLLPLeY---LKGKRSTSDHILEAVNYIEHLQ 155 566***********************77...9******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.09E-15	100	172	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.24E-12	100	159	No hit	No description
PROSITE profile	PS50888	13.706	102	154	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.5E-11	105	155	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.9E-11	105	171	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.5E-5	108	160	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MDNFHSFPLQ QDDDNDHDQF HYLPTNFTNS SFLNYHQEYT TPQLQDLAVD LAPFDSFLEV 60 NTNINFDSNK TNNITNKKGK KLQKSSSAVS LQVENTTADD KQKKIIHKEI ERQRRQEMSS 120 LYASLRQLLP LEYLKGKRST SDHILEAVNY IEHLQKKIKH LEDNRDKLKK DFSSSNVVDY 180 PKSGCSSISE SSRTIVSVRP CLEGMEILIN WNLTNEGFCL SRVLEVLHQE GLSIVNCSCN 240 KVNGSLVHSI RTEVGSQASI DAYELQQKLE AMD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009624566.1	1e-124	PREDICTED: transcription factor bHLH118-like
TrEMBL	A0A1S3XVI9	1e-122	A0A1S3XVI9_TOBAC; transcription factor bHLH118-like
STRING	XP_009624566.1	1e-123	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25400.1	5e-37	bHLH family protein