PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01430g00029.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 483aa    MW: 54493 Da    PI: 8.0408
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01430g00029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94.2e-07384410329
                               SS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIar 29 
                               +W+t E++ l  +v+++G g+Wk+I  
  Peinf101Scf01430g00029.1 384 KWSTLEEDTLRAGVQKYGCGNWKLILD 410
                               8************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.2E-6378411IPR009057Homeodomain-like
SuperFamilySSF466891.22E-7379421IPR009057Homeodomain-like
CDDcd116607.11E-9384415No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    Send to blast
MDIDISSWIL EFVIQQPIPD TILSSLFRSL PIPNNNFSLK KALILRKIES EISNRSVSEK  60
ILELLESFEE LDFQQGIESL KGMKSAYCAV AVECTVKFLN KNLAGNDKGE YYEAVRRIWK  120
RRINLLGNVE YNVGIVSDEL WEWRDEIEAA LLDDRFCEKV MRRSEGVCAV DEVKGFVRGV  180
KERMGPPFLE VVAEMYMSDD AFRASLGGVD KEGSCRDNEK EVHKGNTLTK KKHVALRHTR  240
GASTRTYRGV RITDSVRSRL DAAGKQDDIL PTPEIEGAVE ALKMSSLELR AMVKDPLPDA  300
LKLAERLPFV ARDNVGNQPA TDPNLMNQKS AAHTSERDDS IEDSSQGSPS GTKSFTLPSP  360
KRMENSPLKK YEFKKITTRR KSTKWSTLEE DTLRAGVQKY GCGNWKLILD AYRDIFAVRT  420
AGKSPRKKKA SLGSAESTPD YEPSFVLFCF SNSMVPMTYN SSSHPEDNHL LPYPTNYITH  480
NKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009772851.10.0PREDICTED: uncharacterized protein LOC104223173
RefseqXP_016477615.10.0PREDICTED: uncharacterized protein LOC107799057
TrEMBLA0A1S4ALX60.0A0A1S4ALX6_TOBAC; uncharacterized protein LOC107799057
TrEMBLA0A1U7W6M40.0A0A1U7W6M4_NICSY; uncharacterized protein LOC104223173
STRINGXP_009772851.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.29e-16MYB_related family protein