PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01353g01023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 607aa    MW: 67737.8 Da    PI: 4.5282
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01353g01023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.93e-4731291127
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               lppGfrFhPtd el+++yLk+k+ gkkl + e+i+e++iyk+ PwdLp k ++k+++ ewyfF++r++kya+g r nra ++gyW
  Peinf101Scf01353g01023.1   3 LPPGFRFHPTDVELIMYYLKRKIMGKKLLF-EAISELNIYKFSPWDLPdKsCYKSKDLEWYFFVPRERKYASGARMNRASETGYW 86 
                               79*************************888.89**************96446677777*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                               k tgkd+++   ++++vg  ktLvf++g+ap+g++tdWv+hey 
  Peinf101Scf01353g01023.1  87 KVTGKDRPIRY-DDKTVGSVKTLVFHQGTAPRGKRTDWVIHEYI 129
                               **********9.999****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.85E-572153IPR003441NAC domain
PROSITE profilePS5100554.2193153IPR003441NAC domain
PfamPF023653.2E-234128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    Send to blast
MKLPPGFRFH PTDVELIMYY LKRKIMGKKL LFEAISELNI YKFSPWDLPD KSCYKSKDLE  60
WYFFVPRERK YASGARMNRA SETGYWKVTG KDRPIRYDDK TVGSVKTLVF HQGTAPRGKR  120
TDWVIHEYIF DEKDLADAGV PLGSYVLCKV FQKSGPGPKN GAQYGAPFKE EDWEDDEAPT  180
EHNPSSLPSL PVFPENQSCS MVTCMVDPGS ASRSPFSELH PSSTLPSICA MPSALNSSDI  240
TPLPALPENL SCSVDTTMAD RENESMWPLT ESGPSFAKLG SREMPPDEED DIFHLFDNFT  300
EDPAIFSAGD ENNLCLNNLN QGRNVEDAPF IDGYNIYNGL GNLDNYAELD QTTFGVSVTQ  360
GADYSHNSLF LQDAPYLELN DLEIPLSHSA ETIETAGLMM GNFCAPHDSD VDMRQLCFGG  420
NSSASSQHVS GQNQLPALPE HYIQEVNYNV TNTNQGYNAA YTSDFSSYKQ PEDLSYACQN  480
QERGEQQRKF FSSMHAHCAS NSLCLGFSIH VKAEVILWVD GCTNDALSAV FGDFSSVLTC  540
QSAVDNPHKR VCGYFYDITT AFYFGISLVF IFVSSLRFVV QFLLGVDLSS STVLLRKLQI  600
NASYEIL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-48115313168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006355147.10.0PREDICTED: NAC domain-containing protein 82-like isoform X1
TrEMBLA0A0V0II020.0A0A0V0II02_SOLCH; Putative NAC domain-containing protein 78-like (Fragment)
STRINGXP_009604550.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60502334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.48e-85NAC domain containing protein 82