PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01347g02016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | G2-like | ||||||||
Protein Properties | Length: 366aa MW: 41689.9 Da PI: 6.9824 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.9 | 1.8e-31 | 79 | 132 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ++R+ Peinf101Scf01347g02016.1 79 PRLRWTPELHLRFVHAVERLGGQDRATPKLVLQLMGIKGLSIAHVKSHLQMFRS 132 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.897 | 75 | 135 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.5E-29 | 75 | 133 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.97E-15 | 76 | 134 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-22 | 79 | 134 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.5E-9 | 80 | 130 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MNGGSNREEY SNLSPKNQIE SEEETEEEEE EEKEDDEETE ENNSKPKGTR TSSSNSTVEE 60 SGKKTNSGNV RQYVRSKTPR LRWTPELHLR FVHAVERLGG QDRATPKLVL QLMGIKGLSI 120 AHVKSHLQMF RSKKTDDPNQ ISTDGRFLLE NGDHHIFNLS QLPRLQGFNQ TSTSSLRYGD 180 ALWNRQPNSM YNPYMNNGGA SSISTTRHGF TSHINIGHSS HGQLFPWKTL DIEKNQNRPQ 240 YNFPNQRLWQ GQMGTSSSKQ NLLMTLPINR DRDRDRKGWM STEEAAGTTK TTTNKRKIQD 300 SEINLDLNLS LKTRREEDDH KRLKAEEVGN LLSLSLFSST TSVDQENHDG GEKNTRIMAS 360 TLDLTL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 3e-16 | 80 | 134 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-16 | 80 | 134 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-16 | 80 | 134 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-16 | 80 | 134 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975445 | 1e-42 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009791664.1 | 1e-157 | PREDICTED: uncharacterized protein LOC104238869 isoform X2 | ||||
TrEMBL | A0A1U7XXG3 | 1e-156 | A0A1U7XXG3_NICSY; uncharacterized protein LOC104238869 isoform X2 | ||||
STRING | XP_009791663.1 | 1e-154 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8573 | 21 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 3e-50 | G2-like family protein |