PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 381aa MW: 43025.5 Da PI: 9.2224

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01345g01007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	58.6	1.3e-18	207	243	2	38
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 pr+rWt+ LH+rF++ave LGG+e+AtPk++lelm++ Peinf101Scf01345g01007.1 207 PRMRWTSSLHARFIHAVELLGGHERATPKSVLELMDM 243 9**********************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	4.84E-6	203	243	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.4E-14	205	243	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.3E-12	207	246	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MELFPAQPDL SLQISPPNSK PSSAWKRTNS TTDNEMNLLF WRRALESKNS ISKVPDNSTS 60 LFELSLSNPK PSPEPNSVHF HHLQNNHMNI IHSLYQNHLT NHYHQQQNQG LNSELSFLKP 120 IRGIPVYHQN PPTPTSPFPF TQQTFDNTTT AATLPLRSSA SYINNNNKTI SSTTMAFQSQ 180 QHHNHQAGIM RSRFLSRFPT KRTMRAPRMR WTSSLHARFI HAVELLGGHE RATPKSVLEL 240 MDMYRTVKTT DRAAGPASSG QSEVFDNGSS GDNTSEDLMP DTENSRKTEL SDQQDRQRIH 300 LPGNDYNGLW SNSSSRESWQ LHDKPGDYPG NIPSLEKKQH KDMEANCSSY DRVSAEVSSS 360 SITKTSPKNP NLEFTLGRSS E

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MELFPAQPDL SLQISPPNSK PSSAWKRTNS TTDNEMNLLF WRRALESKNS ISKVPDNSTS  60
LFELSLSNPK PSPEPNSVHF HHLQNNHMNI IHSLYQNHLT NHYHQQQNQG LNSELSFLKP  120
IRGIPVYHQN PPTPTSPFPF TQQTFDNTTT AATLPLRSSA SYINNNNKTI SSTTMAFQSQ  180
QHHNHQAGIM RSRFLSRFPT KRTMRAPRMR WTSSLHARFI HAVELLGGHE RATPKSVLEL  240
MDMYRTVKTT DRAAGPASSG QSEVFDNGSS GDNTSEDLMP DTENSRKTEL SDQQDRQRIH  300
LPGNDYNGLW SNSSSRESWQ LHDKPGDYPG NIPSLEKKQH KDMEANCSSY DRVSAEVSSS  360
SITKTSPKNP NLEFTLGRSS E

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269\|PubMed:11525739, ECO:0000269\|PubMed:15286295, ECO:0000269\|PubMed:16623911, ECO:0000269\|PubMed:17307928}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009615774.1	0.0	PREDICTED: probable transcription factor KAN2 isoform X3
Refseq	XP_016459616.1	0.0	PREDICTED: probable transcription factor KAN2 isoform X3
Swissprot	Q9C616	2e-77	KAN2_ARATH; Probable transcription factor KAN2
TrEMBL	A0A1S3Z5E6	0.0	A0A1S3Z5E6_TOBAC; probable transcription factor KAN2 isoform X3
STRING	XP_009615772.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2738	22	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-77	G2-like family protein

Publications ? help Back to Top
Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis. Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71 [PMID:26108442]