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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf01332g01002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
ARF |
Protein Properties |
Length: 357aa MW: 39650.3 Da PI: 8.2033 |
Description |
ARF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf01332g01002.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 74.8 | 9.7e-24 | 112 | 212 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78
f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD
Peinf101Scf01332g01002.1 112 FAKTLTQSDANNGGGFSVPRYCAETIfpkldfkADPPVQ--TVIAKDVHGQMWQFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGD 194
89*****************************95444444..8******************************************* PP
EEEEEE-SSSEE..EEEEE- CS
B3 79 fvvFkldgrsefelvvkvfr 98
+vvF + +++ l+v+++r
Peinf101Scf01332g01002.1 195 SVVFL--RAENGDLCVGIRR 212
*****..4488889****98 PP
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2 | Auxin_resp | 113.7 | 1.6e-37 | 268 | 351 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83
aa a+++++FevvY+Pra t+e++v++++v++a++++++ GmRfkmafetedss++++ +G++++v+ +dp++Wp+S+Wr+L+
Peinf101Scf01332g01002.1 268 AAYLAANGQPFEVVYYPRANTPEYCVRASSVNAAMSIQWCSGMRFKMAFETEDSSRISWfMGIISSVQVADPIHWPHSPWRLLQ 351
677899****************************************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MKEVVEKCLD SQLWHACAGS MVQIPPVNSK VFYFPQGHAE HTLTNVDFTA LGKIPAMILC 60 RITAVKFLAY PETDEIYAKI RLIPVENKEG DFEDSCVLGS TVAETTEKPT SFAKTLTQSD 120 ANNGGGFSVP RYCAETIFPK LDFKADPPVQ TVIAKDVHGQ MWQFRHIYRG TPRRHLLTTG 180 WSTFVNQKKL VAGDSVVFLR AENGDLCVGI RRVKRGGIGG LESQSWWNSA SGNYGGPYAF 240 LKEGENTMMR SGSNGNKGQV SPESVVKAAY LAANGQPFEV VYYPRANTPE YCVRASSVNA 300 AMSIQWCSGM RFKMAFETED SSRISWFMGI ISSVQVADPI HWPHSPWRLL QVMQQLV
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Functional Description ? help
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Source |
Description |
UniProt | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). |