PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf01278g08037.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 188aa MW: 21410.1 Da PI: 10.0648

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01278g08037.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.4	2.2e-08	61	124	1	70
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkk 70 kfY ++A++ sv++++ ++ ++n+ i+ + fvCskeg r+++ + + ++r et Cka++ k Peinf101Scf01278g08037.1 61 KFYLDHAYR---SVCRNQISRARKNKPIIGQGFVCSKEGLRSKKGLE---STKQRDETIECCKAEIPAIK 124 578888887...79999999999******************9888...8889999999**995433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.6E-6	61	124	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence Send to blast
FKDENKITPV ICALEDKLVI SNLPNQNIVG VGGSLEKLEM NKELRAPYIG MEFQSLDIVF 60 KFYLDHAYRS VCRNQISRAR KNKPIIGQGF VCSKEGLRSK KGLESTKQRD ETIECCKAEI 120 PAIKKKKVIG LEKSIDLLDN VGVRPSKIAP VLINQTKILE KGDAQLMLKY FQKRQSKSSR 180 FFYPIQMD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025884722.1	4e-54	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A3Q7EE03	6e-51	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60