PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01201g04022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 232aa    MW: 27177.9 Da    PI: 8.6939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01201g04022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67e-1181133155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                               +r ah   Er+RR+++ +    Lr++l        ++K s ++ L++A +YI++L+
  Peinf101Scf01201g04022.1  81 KRIAHRDFERQRRQEMANLCGSLRSHLALeY---IKGKRSVSDHLQQALNYIQHLK 133
                               799**************************77...********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.82780132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-881132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-1181147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.71E-781134No hitNo description
Gene3DG3DSA:4.10.280.103.1E-881147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MDSLWEIFSF HQIQDYDHHQ ELLQMPSSTT PCQLPQQELT NCETSLAKND TNKKKRSRRL  60
SGVPDTTNGG MNIRDQNKLI KRIAHRDFER QRRQEMANLC GSLRSHLALE YIKGKRSVSD  120
HLQQALNYIQ HLKNNMKELE KRRDKLKILD HYSGDSKVDS GSVHKYNLAD YVKVNPCEDG  180
VEILISDEFW KERLPLSRVL EELVKRKLNV VTCVSTKVDE TFIHKIHAEV YY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18092KRIAHRDFERQRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016437313.12e-99PREDICTED: transcription factor bHLH118-like
RefseqXP_019245628.11e-99PREDICTED: transcription factor bHLH118-like isoform X1
TrEMBLA0A1J6IWZ03e-98A0A1J6IWZ0_NICAT; Transcription factor bhlh126
TrEMBLA0A1S3XC324e-98A0A1S3XC32_TOBAC; transcription factor bHLH118-like
STRINGXP_009597785.14e-98(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-33bHLH family protein