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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Peinf101Scf01192g02062.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
B3 |
Protein Properties |
Length: 223aa MW: 25799.6 Da PI: 4.062 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf01192g02062.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 59.4 | 6.5e-19 | 20 | 110 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfv 80
f+k+l +sdv++++r+v+pkk ae++ +++ +e++ +t+ d +g +W+++++y +++s++yvl+ ++ +Fv+ +gL++gD +
Peinf101Scf01192g02062.1 20 FDKQLQNSDVSSLRRIVVPKKAAERYlpNLEIKEGFPITMDDMDGiHVWSFRYRYwpNNSSRMYVLE-NTGDFVQTHGLRQGDYF 103
89**************************555557888********9*********888899999999.***************** PP
EEEE-SS CS
B3 81 vFkldgr 87
++++++
Peinf101Scf01192g02062.1 104 ALHYNDQ 110
*998754 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008284 | Biological Process | positive regulation of cell proliferation |
GO:0009733 | Biological Process | response to auxin |
GO:0010116 | Biological Process | positive regulation of abscisic acid biosynthetic process |
GO:0010262 | Biological Process | somatic embryogenesis |
GO:0010373 | Biological Process | negative regulation of gibberellin biosynthetic process |
GO:0048573 | Biological Process | photoperiodism, flowering |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MWWDSQFDMA LEPTGFRFLF DKQLQNSDVS SLRRIVVPKK AAERYLPNLE IKEGFPITMD 60 DMDGIHVWSF RYRYWPNNSS RMYVLENTGD FVQTHGLRQG DYFALHYNDQ KQIYGIEARK 120 AGNGSVFSGY EAEDMILTDY AQAADDGNGV LLNEGELDMS NFYFPAMDNE MGMSFIYDTS 180 FWNEPAFDFV GGPMTYYSTN VFPMPSFGSI EDSFSVDDFY DRA
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j9b_A | 4e-47 | 16 | 122 | 1 | 107 | B3 domain-containing transcription factor FUS3 |
6j9b_D | 4e-47 | 16 | 122 | 1 | 107 | B3 domain-containing transcription factor FUS3 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC215600 | 7e-34 | AC215600.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0098J01, complete sequence. |
GenBank | HG975514 | 7e-34 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |