PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01188g00003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 137aa    MW: 15953.7 Da    PI: 4.1221
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01188g00003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.1e-08836129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              rg+WT++Ed++lv +vk++G ++W+  a+
  Peinf101Scf01188g00003.1  8 RGPWTEQEDLQLVFYVKLFGDRRWDFLAK 36
                              89**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.911336IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.6E-7336IPR009057Homeodomain-like
SuperFamilySSF466899.33E-7437IPR009057Homeodomain-like
PfamPF002495.7E-6836IPR001005SANT/Myb domain
CDDcd001675.34E-41037No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MVQEEVRRGP WTEQEDLQLV FYVKLFGDRR WDFLAKVSEN ETNFYDTGGL ELLQSADGQK  60
KVSGHEKGES MKVYSMDEIW KDIELSEEND TITSNKLPVM ANVSPLWDYC PGSLWISDEE  120
ESKMFPPFSE HVDDHLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027773184.11e-28transcription factor MYB48-like
TrEMBLA0A4D9BXC54e-39A0A4D9BXC5_SALSN; Myb proto-oncogene protein, plant
STRINGSolyc06g005330.2.14e-27(Solanum lycopersicum)
STRINGPGSC0003DMT4000282312e-27(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1619035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.33e-15myb domain protein 59