PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01183g00010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 163aa    MW: 18549.5 Da    PI: 9.6912
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01183g00010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.8e-0584106123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C+ Cg+ F++   L  H+r+H
  Peinf101Scf01183g00010.1  84 HECSFCGEDFPTGQALGGHMRKH 106
                               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.33E-835106No hitNo description
SMARTSM003550.583759IPR015880Zinc finger, C2H2-like
PfamPF139129.2E-123761IPR007087Zinc finger, C2H2
PROSITE profilePS501579.7433764IPR007087Zinc finger, C2H2
PROSITE patternPS0002803959IPR007087Zinc finger, C2H2
PfamPF139126.3E-1183108IPR007087Zinc finger, C2H2
SMARTSM003550.01784106IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.51584111IPR007087Zinc finger, C2H2
PROSITE patternPS00028086106IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MTIKKRSREE LAKVETLAMA NCVNILEKNT SLARKIFECK TCKKQFDSFQ ALGGHRASHK  60
KPRFITAADF SIGSPNYKPN KKAHECSFCG EDFPTGQALG GHMRKHRDKL GHELKEQKQK  120
NCDEIVEIEK KNYSGTGKLF FDLNLTPYEN DLMLGIIPLK VFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0066030.0AB006603.1 Petunia x hybrida mRNA for ZPT2-8, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009594752.12e-72PREDICTED: zinc finger protein ZAT11-like
RefseqXP_016508475.12e-72PREDICTED: zinc finger protein ZAT11-like
TrEMBLO220881e-114O22088_PETHY; ZPT2-8
STRINGXP_009594752.19e-72(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.18e-31C2H2 family protein